Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.3 --

Orthologous regulated operons containing araA gene

Properties
Regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Built upon 56 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -174
Score: 8.3147
Sequence: TAACAAAAGTGTCTATA-(4)-CGACAGAAATGTCCACA
Position: -100
Score: 8.12532
Sequence: TAGCATTTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Locus tag: CKO_03319
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: CKO_03320
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: CKO_03321
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB-araA-araD -174 8.3 TAACAAAAGTGTCTATA-(4)-CGACAGAAATGTCCACA CKO_03319
-100 8.1 TAGCATTTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Enterobacter sp. 638
Position: -172
Score: 8.63485
Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA
Position: -98
Score: 8.10535
Sequence: CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Locus tag: Ent638_0610
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Ent638_0609
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: Ent638_0608
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB-araA-araD -172 8.6 TAACAAAAGTGTCTATA-(4)-CGGCAGAAATGTCCACA Ent638_0610
-98 8.1 CAGCAATTTAATCCATA-(4)-TAGCGGATCCTGCCTGA
Erwinia amylovora ATCC 49946
Position: -174
Score: 8.34188
Sequence: CAGCTGATTTATCCATA-(4)-CAGCAAATTTAACCTTT
Position: -99
Score: 6.31618
Sequence: CGACAGAAAAATACATA-(4)-TAGCCTGCTCAACCTAA
Locus tag: EAM_1697
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: EAM_1696
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
araB-araA -174 8.3 CAGCTGATTTATCCATA-(4)-CAGCAAATTTAACCTTT EAM_1697
-99 6.3 CGACAGAAAAATACATA-(4)-TAGCCTGCTCAACCTAA
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -176
Score: 7.10563
Sequence: TGACAGGTTTGTGCATA-(4)-TAGCAAATTTAACCAAT
Position: -101
Score: 6.42564
Sequence: CGACAGAAAAATACATA-(4)-TAGCTAACCACTCCTAA
Locus tag: ECA2274
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: ECA2275
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
araB-araA -176 7.1 TGACAGGTTTGTGCATA-(4)-TAGCAAATTTAACCAAT ECA2274
-101 6.4 CGACAGAAAAATACATA-(4)-TAGCTAACCACTCCTAA
Escherichia coli str. K-12 substr. MG1655
Position: -173
Score: 8.65678
Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
Position: -99
Score: 7.98029
Sequence: TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA
Locus tag: b0063
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: b0062
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: b0061
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB-araA-araD -173 8.7 TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA b0063
-99 8 TAGCATTTTTATCCATA-(4)-TAGCGGATCCTACCTGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -172
Score: 8.65678
Sequence: TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA
Position: -98
Score: 8.46731
Sequence: CAGCAAAATAATCCATA-(4)-TAGCGAATCCGGCCTGA
Locus tag: KPN_00062
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: KPN_00061
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: KPN_00060
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB-araA-araD -172 8.7 TAACAAAAGTGTCTATA-(4)-CGGCAGAAAAGTCCACA KPN_00062
-98 8.5 CAGCAAAATAATCCATA-(4)-TAGCGAATCCGGCCTGA
Salmonella typhimurium LT2
Position: -173
Score: 8.39881
Sequence: TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA
Position: -99
Score: 8.08342
Sequence: TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA
Locus tag: STM0103
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: STM0102
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: STM0101
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
araB-araA-araD -173 8.4 TAACAGAAGTGTCTATA-(4)-TGGCTGGAATGTCCACA STM0103
-99 8.1 TAGCATTTTTGTCCATA-(4)-TAGCGGATCCTGCCTGA
Serratia proteamaculans 568
Position: -175
Score: 7.52482
Sequence: CAGCAGATATGTGCATA-(4)-TAGCGAATTCCGCCAAG
Position: -100
Score: 7.10382
Sequence: AAGCAGAAAAGTGCATA-(4)-CAGCTAACGGCTCCTCA
Locus tag: Spro_2244
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: Spro_2243
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
araB-araA -175 7.5 CAGCAGATATGTGCATA-(4)-TAGCGAATTCCGCCAAG Spro_2244
-100 7.1 AAGCAGAAAAGTGCATA-(4)-CAGCTAACGGCTCCTCA
Yersinia pestis KIM
Position: -189
Score: 7.8161
Sequence: CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
Position: -114
Score: 7.50937
Sequence: AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
Locus tag: y2095
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: y2094
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
araB-araA -189 7.8 CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG y2095
-114 7.5 AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA