Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing plyC2 gene

Properties
Regulog: HTCS_Rgu-1 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector: Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Phylum: Bacteroidetes
Built upon 26 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides thetaiotaomicron VPI-5482
Position: -221
Score: 8.30822
Sequence: AAAATAGTGCAC-(9)-CAAAAAGTCCCC
Locus tag: BT4119
Name: plyC2
Funciton: Pectate lyase C
Locus tag: BT4120
Name: BT4120
Funciton: Predicted pectin lyase
Locus tag: BT4121
Name: susC_Rgu-2
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4122
Name: susD_Rgu-2
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligosaccharides
Locus tag: BT4123
Name: pehX1
Funciton: Polygalacturonase (EC 3.2.1.15 )
plyC2-BT4120-susC_Rgu-2-susD_Rgu-2-pehX1 -221 8.3 AAAATAGTGCAC-(9)-CAAAAAGTCCCC BT4119