Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing susC_Rgu-1 gene

Properties
Regulog: HTCS_Rgu-1 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector: Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides
Phylum: Bacteroidetes
Built upon 26 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides cellulosilyticus DSM 14838
Position: -126
Score: 9.01777
Sequence: CAAAAAATACCA-(9)-CAGATATTACAC
Locus tag: BACCELL_03135
Name: susC_Rgu-1
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BACCELL_03134
Name: susD_Rgu-1
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
Locus tag: BACCELL_03133
Name: BT4112
Funciton: Predicted pectin lyase
susC_Rgu-1-susD_Rgu-1-BT4112 -126 9 CAAAAAATACCA-(9)-CAGATATTACAC BACCELL_03135
Bacteroides dorei DSM 17855
Position: -124
Score: 9.0316
Sequence: TAATAAATCCAC-(9)-TAAAAACTACAC
Locus tag: BACDOR_03276
Name: susC_Rgu-1
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BACDOR_03275
Name: susD_Rgu-1
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
susC_Rgu-1-susD_Rgu-1 -124 9 TAATAAATCCAC-(9)-TAAAAACTACAC BACDOR_03276
Bacteroides eggerthii DSM 20697
Position: -127
Score: 9.28353
Sequence: CAAAAAGTACCA-(9)-CAAAAATTACAC
Locus tag: BACEGG_00870
Name: susC_Rgu-1
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BACEGG_00869
Name: susD_Rgu-1
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
Locus tag: BACEGG_00868
Name: BT4112
Funciton: Predicted pectin lyase
susC_Rgu-1-susD_Rgu-1-BT4112 -127 9.3 CAAAAAGTACCA-(9)-CAAAAATTACAC BACEGG_00870
Bacteroides ovatus ATCC 8483
Position: -128
Score: 9.53095
Sequence: CAAAAAATACGA-(9)-CAAATATTGCAC
Locus tag: BACOVA_04911
Name: susC_Rgu-1
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BACOVA_04910
Name: susD_Rgu-1
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
Locus tag: BACOVA_04909
Name: BT4112
Funciton: Predicted pectin lyase
Locus tag: BACOVA_04908
Name: pemC
Funciton: Pectinesterase (EC 3.1.1.11)
Locus tag: BACOVA_04907
Name: plyC1
Funciton: Pectate lyase C
Locus tag: BACOVA_04906
Name: plyC1
Funciton: Pectate lyase C
Locus tag: BACOVA_04905
Name: plyC1
Funciton: Pectate lyase C
susC_Rgu-1-susD_Rgu-1-BT4112-pemC-plyC1-plyC1-plyC1 -128 9.5 CAAAAAATACGA-(9)-CAAATATTGCAC BACOVA_04911
Bacteroides thetaiotaomicron VPI-5482
Position: -127
Score: 9.434
Sequence: CAAAAAATACTA-(9)-CAAATATTACAC
Locus tag: BT4114
Name: susC_Rgu-1
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BT4113
Name: susD_Rgu-1
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
Locus tag: BT4112
Name: BT4112
Funciton: Predicted pectin lyase
susC_Rgu-1-susD_Rgu-1-BT4112 -127 9.4 CAAAAAATACTA-(9)-CAAATATTACAC BT4114
Bacteroides vulgatus ATCC 8482
Position: -123
Score: 9.0316
Sequence: TAATAAATCCAC-(9)-TAAAAACTACAC
Locus tag: BVU_1799
Name: susC_Rgu-1
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligosaccharides
Locus tag: BVU_1800
Name: susD_Rgu-1
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
susC_Rgu-1-susD_Rgu-1 -123 9 TAATAAATCCAC-(9)-TAAAAACTACAC BVU_1799