Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing ycnB gene

Properties
Regulog: PerR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Manganese homeostasis; Oxidative stress response; Iron homeostasis
Effector: Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide
Phylum: Firmicutes
Built upon 49 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus brevis ATCC 367
Position: -39
Score: 5.17713
Sequence: TAAGAATATTTCTAA
Locus tag: LVIS_1917
Name: ycnB
Funciton: Predicted permease
ycnB -39 5.2 TAAGAATATTTCTAA LVIS_1917
Lactobacillus casei ATCC 334
Position: -192
Score: 5.31346
Sequence: TTAGATTAATTCTAA
Locus tag: LSEI_2417
Name: cueO
Funciton: Predicted copper oxidase
Locus tag: LSEI_2416
Name: ycnB
Funciton: Predicted permease
cueO-ycnB -192 5.3 TTAGATTAATTCTAA LSEI_2417
Lactobacillus fermentum IFO 3956
Position: -109
Score: 5.32475
Sequence: TTATAATCATTTTAA
Position: -30
Score: 4.81188
Sequence: TTATAAGTTTTCTAA
Locus tag: LAF_1361
Name: ycnB
Funciton: Predicted permease
ycnB -109 5.3 TTATAATCATTTTAA LAF_1361
-30 4.8 TTATAAGTTTTCTAA
Lactobacillus reuteri JCM 1112
Position: -107
Score: 5.4229
Sequence: TTAAAATAATTATAA
Position: -31
Score: 5.60221
Sequence: TAATAATTATTCTAA
Locus tag: LAR_1231
Name: ycnB
Funciton: Predicted permease
ycnB -107 5.4 TTAAAATAATTATAA LAR_1231
-31 5.6 TAATAATTATTCTAA
Lactobacillus rhamnosus GG
Position: -72
Score: 4.7726
Sequence: TTAGATTAATTCCAA
Locus tag: LGG_02415
Name: cueO
Funciton: Predicted copper oxidase
Locus tag: LGG_02414
Name: ycnB
Funciton: Predicted permease
cueO-ycnB -72 4.8 TTAGATTAATTCCAA LGG_02415
Lactobacillus salivarius subsp. salivarius UCC118
Position: -64
Score: 4.56916
Sequence: TTACAAAAATTCTAA
Locus tag: LSL_1578
Name: ycnB
Funciton: Predicted permease
ycnB -64 4.6 TTACAAAAATTCTAA LSL_1578
Pediococcus pentosaceus ATCC 25745
Position: -73
Score: 5.31346
Sequence: TTAGATTAATTCTAA
Locus tag: PEPE_0502
Name: cueO
Funciton: Predicted copper oxidase
Locus tag: PEPE_0503
Name: ycnB
Funciton: Predicted permease
cueO-ycnB -73 5.3 TTAGATTAATTCTAA PEPE_0502