Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing rplS gene

Properties
Regulator type: RNA regulatory element
Name: L19_leader
RFAM: RF00556
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -61
Score: 23.42
Sequence: AGGCGGTCCTCTGTC...
Locus tag: CAC1759
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -61 23.4 AGGCGGTCCTCTGTC... CAC1759
Clostridium bartlettii DSM 16795
Position: -63
Score: 24.76
Sequence: ACGGGCATTCCTCTG...
Locus tag: CLOBAR_02203
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -63 24.8 ACGGGCATTCCTCTG... CLOBAR_02203
Clostridium beijerincki NCIMB 8052
Position: -64
Score: 27.32
Sequence: GGGCGTTCCGCTGTC...
Locus tag: Cbei_1180
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -64 27.3 GGGCGTTCCGCTGTC... Cbei_1180
Clostridium botulinum A str. ATCC 3502
Position: -78
Score: 21.89
Sequence: ACGGGCGGTCCTCTG...
Locus tag: CBO2444
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -78 21.9 ACGGGCGGTCCTCTG... CBO2444
Clostridium butyricum 5521
Position: -69
Score: 24.48
Sequence: GGGCGTTCCTCTGTC...
Locus tag: CBY_0541
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -69 24.5 GGGCGTTCCTCTGTC... CBY_0541
Clostridium cellulolyticum H10
Position: -58
Score: 27.93
Sequence: GGATGGTCCTCTGCA...
Locus tag: Ccel_0714
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -58 27.9 GGATGGTCCTCTGCA... Ccel_0714
Clostridium difficile 630
Position: -65
Score: 22.19
Sequence: GGGCGTTCCTCTGTT...
Locus tag: CD1257
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -65 22.2 GGGCGTTCCTCTGTT... CD1257
Clostridium kluyveri DSM 555
Position: -68
Score: 22.06
Sequence: GGGCGTTCCTCTGTC...
Locus tag: CKL_1406
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -68 22.1 GGGCGTTCCTCTGTC... CKL_1406
Clostridium leptum DSM 753
Position: -51
Score: 20.41
Sequence: TGACAGTCCTCTGCT...
Locus tag: CLOLEP_02366
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -51 20.4 TGACAGTCCTCTGCT... CLOLEP_02366
Clostridium nexile DSM 1787
Position: -64
Score: 27.53
Sequence: AGAGATGGTCCTCTG...
Locus tag: CLONEX_03041
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -64 27.5 AGAGATGGTCCTCTG... CLONEX_03041
Clostridium novyi NT
Position: -76
Score: 17.44
Sequence: ACGGGCGGTCCTCTG...
Locus tag: NT01CX_2208
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -76 17.4 ACGGGCGGTCCTCTG... NT01CX_2208
Clostridium perfringens ATCC 13124
Position: -71
Score: 31.71
Sequence: ACCGGCGGTCCTCTG...
Locus tag: CPF_1962
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -71 31.7 ACCGGCGGTCCTCTG... CPF_1962
Clostridium scindens ATCC 35704
Position: -60
Score: 19.48
Sequence: AGATGGTCCTCTAGT...
Locus tag: CLOSCI_01325
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -60 19.5 AGATGGTCCTCTAGT... CLOSCI_01325
Clostridium sp. L2-50
Position: -63
Score: 32.36
Sequence: ATCGATGGTCCTCTG...
Locus tag: CLOL250_00256
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -63 32.4 ATCGATGGTCCTCTG... CLOL250_00256
Clostridium sp. OhILAs
Position: -57
Score: 18.6
Sequence: GGACGTTCCTCTACA...
Locus tag: Clos_1468
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -57 18.6 GGACGTTCCTCTACA... Clos_1468
Clostridium sp. SS2/1
Position: 2
Score: 28.49
Sequence: GGATGGTCCTCTGTT...
Locus tag: CLOSS21_02544
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS 2 28.5 GGATGGTCCTCTGTT... CLOSS21_02544
Clostridium tetani E88
Position: -48
Score: 21.28
Sequence: GGGCGGTCCTCTGTT...
Locus tag: CTC01252
Name: rplS
Funciton: LSU ribosomal protein L19p
rplS -48 21.3 GGGCGGTCCTCTGTT... CTC01252