Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing ywoF gene

Properties
Regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Built upon 304 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus licheniformis DSM 13
Position: -225
Score: 4.65709
Sequence: TTTTACATTATGTAACA
Position: -215
Score: 3.60578
Sequence: TGTAACAAACTTTCAAA
Position: -106
Score: 3.65907
Sequence: TTTAATATTTACTGATA
Locus tag: BLi02096
Name: brnQ
Funciton: Branched-chain amino acid transport system carrier protein
Locus tag: BLi02095
Name: ywoF
Funciton: Pectin lyase like protein
brnQ-ywoF -225 4.7 TTTTACATTATGTAACA BLi02096
-215 3.6 TGTAACAAACTTTCAAA
-106 3.7 TTTAATATTTACTGATA
Bacillus pumilus SAFR-032
Position: -121
Score: 5.0194
Sequence: TGTAAGATATTCTTTCA
Locus tag: BPUM_3499
Name: ywoF
Funciton: Pectin lyase like protein
ywoF -121 5 TGTAAGATATTCTTTCA BPUM_3499
Bacillus subtilis subsp. subtilis str. 168
Position: -78
Score: 4.32038
Sequence: AGTTATATTAAGTGACA
Position: -66
Score: 3.70344
Sequence: TGACATCTAATGTCAAA
Position: -56
Score: 4.30973
Sequence: TGTCAAAAAACATAACG
Locus tag: BSU36470
Name: pucI
Funciton: Allantoin permease
Locus tag: BSU36460
Name: ywoF
Funciton: Pectin lyase like protein
pucI-ywoF -78 4.3 AGTTATATTAAGTGACA BSU36470
-66 3.7 TGACATCTAATGTCAAA
-56 4.3 TGTCAAAAAACATAACG