Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing ycsG gene

Properties
Regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Built upon 304 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -137
Score: 4.88673
Sequence: TGGTAGGTTTTCTGACA
Locus tag: RBAM_004280
Name: lamB
Funciton: Lactam utilization protein LamB
Locus tag: RBAM_004290
Name: ycsG
Funciton: Permease (transport protein)
Locus tag: RBAM_004300
Name: ycsI
Funciton: Hypothetical protein
Locus tag: RBAM_004310
Name: kipI
Funciton: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
Locus tag: RBAM_004320
Name: kipA
Funciton: Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
Locus tag: RBAM_004330
Name: kipR
Funciton: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family
lamB-ycsG-ycsI-kipI-kipA-kipR -137 4.9 TGGTAGGTTTTCTGACA RBAM_004280
Bacillus licheniformis DSM 13
Position: -155
Score: 4.62258
Sequence: TGTGAGGTTTCCTAACA
Locus tag: BLi00498
Name: lamB
Funciton: Lactam utilization protein LamB
Locus tag: BLi00499
Name: ycsG
Funciton: Permease (transport protein)
Locus tag: BLi00500
Name: ycsI
Funciton: Hypothetical protein
Locus tag: BLi00501
Name: kipI
Funciton: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
Locus tag: BLi00502
Name: kipA
Funciton: Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
Locus tag: BLi00503
Name: kipR
Funciton: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family
lamB-ycsG-ycsI-kipI-kipA-kipR -155 4.6 TGTGAGGTTTCCTAACA BLi00498
Bacillus pumilus SAFR-032
Position: -113
Score: 5.51309
Sequence: TGTTATATTTTCTAACA
Locus tag: BPUM_0379
Name: lamB
Funciton: Lactam utilization protein LamB
Locus tag: BPUM_0380
Name: ycsG
Funciton: Permease (transport protein)
Locus tag: BPUM_0381
Name: ycsI
Funciton: Hypothetical protein
Locus tag: BPUM_0382
Name: kipI
Funciton: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
Locus tag: BPUM_0383
Name: kipA
Funciton: Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
Locus tag: BPUM_0384
Name: kipR
Funciton: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family
lamB-ycsG-ycsI-kipI-kipA-kipR -113 5.5 TGTTATATTTTCTAACA BPUM_0379
Bacillus subtilis subsp. subtilis str. 168
Position: -145
Score: 4.88673
Sequence: TGGTAGGTTTTCTGACA
Position: -52
Score: 3.89757
Sequence: CGGGACAATAAATGACA
Locus tag: BSU04050
Name: lamB
Funciton: Lactam utilization protein LamB
Locus tag: BSU04060
Name: ycsG
Funciton: Permease (transport protein)
Locus tag: BSU04070
Name: ycsI
Funciton: Hypothetical protein
Locus tag: BSU04080
Name: kipI
Funciton: Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
Locus tag: BSU04090
Name: kipA
Funciton: Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
Locus tag: BSU04100
Name: kipR
Funciton: Transcriptional regulator of initiation of developmental transcription at the onset of sporulation, IclR family
lamB-ycsG-ycsI-kipI-kipA-kipR -145 4.9 TGGTAGGTTTTCTGACA BSU04050
-52 3.9 CGGGACAATAAATGACA