Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing pucD gene

Properties
Regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Built upon 304 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus clausii KSM-K16
Position: -270
Score: 4.52983
Sequence: TGTGAAAAAACCTTACA
Position: -141
Score: 4.0423
Sequence: GGGGAGAAGATCTAACA
Locus tag: ABC3747
Name: null
Funciton: Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
Locus tag: ABC3746
Name: null
Funciton: Nitrate/sulfonate/bicarbonate ABC transporter permease
Locus tag: ABC3745
Name: null
Funciton: Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Locus tag: ABC3744
Name: pucA
Funciton: Xanthine dehydrogenase subunit A
Locus tag: ABC3743
Name: pucB
Funciton: Xanthine dehydrogenase
Locus tag: ABC3742
Name: pucC
Funciton: Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)
Locus tag: ABC3741
Name: pucD
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: ABC3740
Name: pucE
Funciton: Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4)
ABC3747-ABC3746-ABC3745-pucA-pucB-pucC-pucD-pucE -270 4.5 TGTGAAAAAACCTTACA ABC3747
-141 4 GGGGAGAAGATCTAACA
Bacillus subtilis subsp. subtilis str. 168
Position: -125
Score: 4.65577
Sequence: TGTTTCATTTTCTGACA
Position: -101
Score: 4.02253
Sequence: AGTCATTTTTTCTTCCA
Locus tag: BSU32510
Name: pucA
Funciton: Xanthine dehydrogenase subunit A
Locus tag: BSU32500
Name: pucB
Funciton: Xanthine dehydrogenase
Locus tag: BSU32490
Name: pucC
Funciton: Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)
Locus tag: BSU32480
Name: pucD
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: BSU32470
Name: pucE
Funciton: xanthine dehydrogenase, iron-sulfur subunit
pucA-pucB-pucC-pucD-pucE -125 4.7 TGTTTCATTTTCTGACA BSU32510
-101 4 AGTCATTTTTTCTTCCA
Paenibacillus sp. JDR-2
Position: -179
Score: 4.12283
Sequence: TGTGATCTATTGTTACG
Position: -96
Score: 4.30272
Sequence: TGTAAGATATATTGACG
Locus tag: Pjdr2_3323
Name: null
Funciton: Basic membrane lipoprotein
Locus tag: Pjdr2_3322
Name: null
Funciton: ABC transporter related
Locus tag: Pjdr2_3321
Name: null
Funciton: Inner-membrane translocator
Locus tag: Pjdr2_3320
Name: null
Funciton: Inner-membrane translocator
Locus tag: Pjdr2_3319
Name: pucC
Funciton: Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4)
Locus tag: Pjdr2_3318
Name: pucD
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: Pjdr2_3317
Name: null
Funciton: (2Fe-2S)-binding domain protein
Locus tag: Pjdr2_3316
Name: null
Funciton: Uricase (EC 1.7.3.3)
Locus tag: Pjdr2_3315
Name: pucL
Funciton: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (EC 4.1.1.n1) / Uricase (EC 1.7.3.3)
Locus tag: Pjdr2_3314
Name: pucM
Funciton: 5-hydroxyisourate hydrolase
Locus tag: Pjdr2_3313
Name: pucH
Funciton: Allantoinase (EC 3.5.2.5)
Locus tag: Pjdr2_3312
Name: pucF
Funciton: Allantoate amidohydrolase (EC 3.5.3.9)
Locus tag: Pjdr2_3311
Name: pucG
Funciton: Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44)
Pjdr2_3323-Pjdr2_3322-Pjdr2_3321-Pjdr2_3320-pucC-pucD-Pjdr2_3317-Pjdr2_3316-pucL-pucM-pucH-pucF-pucG -179 4.1 TGTGATCTATTGTTACG Pjdr2_3323
-96 4.3 TGTAAGATATATTGACG