Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing oppF gene

Properties
Regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Built upon 304 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Anoxybacillus flavithermus WK1
Position: -127
Score: 3.962
Sequence: TGTGAACAAACCTCACA
Position: -99
Score: 4.6215
Sequence: TGTTAGAAAATTTAAAA
Locus tag: Aflv_2133
Name: dppE
Funciton: Oligopeptide ABC transporter (oligopeptide-binding protein)
Locus tag: Aflv_2132
Name: oppB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: Aflv_2131
Name: oppC
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: Aflv_2130
Name: oppD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: Aflv_2129
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
dppE-oppB-oppC-oppD-oppF -127 4 TGTGAACAAACCTCACA Aflv_2133
-99 4.6 TGTTAGAAAATTTAAAA
Bacillus amyloliquefaciens FZB42
Position: -231
Score: 4.28387
Sequence: TGACAGAAAAACTGACC
Locus tag: RBAM_011430
Name: oppA
Funciton: Oligopeptide ABC transporter (binding lipoprotein)
Locus tag: RBAM_011440
Name: oppB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: RBAM_011450
Name: oppC
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: RBAM_011460
Name: oppD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: RBAM_011470
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
oppA-oppB-oppC-oppD-oppF -231 4.3 TGACAGAAAAACTGACC RBAM_011430
Bacillus clausii KSM-K16
Position: -558
Score: 4.32119
Sequence: TGTAAGATTTCTTATCA
Locus tag: ABC3661
Name: appA
Funciton: Oligopeptide ABC transporter (oligopeptide-binding protein)
Locus tag: ABC3660
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: ABC3659
Name: null
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: ABC3658
Name: appD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: ABC3657
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: ABC3656
Name: null
Funciton: Peptidase
Locus tag: ABC3655
Name: null
Funciton: Sodium-dependent dicarboxylate transporter
Locus tag: ABC3654
Name: null
Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
Locus tag: ABC3653
Name: null
Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
appA-appB-ABC3659-appD-oppF-ABC3656-ABC3655-ABC3654-ABC3653 -558 4.3 TGTAAGATTTCTTATCA ABC3661
Bacillus licheniformis DSM 13
Position: -249
Score: 4.90494
Sequence: TGGCAGAAAACCTGACA
Locus tag: BLi01232
Name: oppA
Funciton: Oligopeptide ABC transporter (binding lipoprotein)
Locus tag: BLi01233
Name: oppB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: BLi01234
Name: oppC
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: BLi01235
Name: oppD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: BLi01236
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
oppA-oppB-oppC-oppD-oppF -249 4.9 TGGCAGAAAACCTGACA BLi01232
Bacillus subtilis subsp. subtilis str. 168
Position: -231
Score: 4.32132
Sequence: TGGAAGAAAAACTAACG
Locus tag: BSU11430
Name: oppA
Funciton: Oligopeptide ABC transporter (binding lipoprotein)
Locus tag: BSU11440
Name: oppB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: BSU11450
Name: oppC
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: BSU11460
Name: oppD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: BSU11470
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
oppA-oppB-oppC-oppD-oppF -231 4.3 TGGAAGAAAAACTAACG BSU11430
Geobacillus kaustophilus HTA426
Position: -423
Score: 4.36814
Sequence: TGTCAAAATTATTAACA
Position: -173
Score: 4.22526
Sequence: TTTCAAATATACTAACA
Locus tag: GK0811
Name: dppE
Funciton: Oligopeptide ABC transporter (oligopeptide-binding protein)
Locus tag: GK0812
Name: oppB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: GK0813
Name: oppC
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: GK0814
Name: oppD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: GK0815
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
dppE-oppB-oppC-oppD-oppF -423 4.4 TGTCAAAATTATTAACA GK0811
-173 4.2 TTTCAAATATACTAACA
Paenibacillus sp. JDR-2
Position: -183
Score: 4.40696
Sequence: TGGTATATTAATTAACA
Locus tag: Pjdr2_5833
Name: oppA
Funciton: Oligopeptide ABC transporter (binding lipoprotein)
Locus tag: Pjdr2_5832
Name: oppB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: Pjdr2_5831
Name: oppC
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: Pjdr2_5830
Name: oppD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: Pjdr2_5829
Name: oppF
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
oppA-oppB-oppC-oppD-oppF -183 4.4 TGGTATATTAATTAACA Pjdr2_5833