Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing appB gene

Properties
Regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Built upon 304 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus amyloliquefaciens FZB42
Position: -101
Score: 4.07189
Sequence: TGTAATAATATACAACT
Locus tag: RBAM_011360
Name: appD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: RBAM_011370
Name: appF
Funciton: oligopeptide ABC transporter (ATP-binding protein)
Locus tag: RBAM_011380
Name: appA
Funciton: Oligopeptide ABC transporter (substrate-binding)
Locus tag: RBAM_011390
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: RBAM_011400
Name: appC
Funciton: Oligopeptide ABC transporter (permease)
appD-appF-appA-appB-appC -101 4.1 TGTAATAATATACAACT RBAM_011360
Bacillus clausii KSM-K16
Position: -446
Score: 4.95564
Sequence: TGTTATATCTTCTTACA
Locus tag: ABC3095
Name: null
Funciton: Transcriptional regulator, Lrp/AsnC family
Locus tag: ABC3094
Name: oppD
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: ABC3093
Name: oppF
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: ABC3092
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: ABC3091
Name: oppC
Funciton: Oligopeptide ABC transporter permease
Locus tag: ABC3090
Name: oppA
Funciton: Oligopeptide ABC transporter substrate-binding protein
ABC3095-oppD-oppF-appB-oppC-oppA -446 5 TGTTATATCTTCTTACA ABC3095
Bacillus halodurans C-125
Position: -180
Score: 4.33351
Sequence: TGTGAGATAATTTAGCA
Locus tag: BH3641
Name: BH3641
Funciton: Transcriptional regulator, Lrp/AsnC family
Locus tag: BH3640
Name: oppD
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: BH3639
Name: oppF
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: BH3638
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: BH3637
Name: oppC
Funciton: Oligopeptide ABC transporter permease
Locus tag: BH3636
Name: oppA
Funciton: Oligopeptide ABC transporter substrate-binding protein
BH3641-oppD-oppF-appB-oppC-oppA -180 4.3 TGTGAGATAATTTAGCA BH3641
Bacillus subtilis subsp. subtilis str. 168
Position: -119
Score: 4.07189
Sequence: TGTAATAATATACAACT
Locus tag: BSU11360
Name: appD
Funciton: Oligopeptide ABC transporter (ATP-binding protein)
Locus tag: BSU11370
Name: appF
Funciton: oligopeptide ABC transporter (ATP-binding protein)
Locus tag: BSU11381
Name: appA
Funciton: Oligopeptide ABC transporter (substrate-binding)
Locus tag: BSU11382
Name: appA
Funciton: Oligopeptide ABC transporter (substrate-binding)
Locus tag: BSU11390
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: BSU11400
Name: appC
Funciton: Oligopeptide ABC transporter (permease)
appD-appF-appA-appA-appB-appC -119 4.1 TGTAATAATATACAACT BSU11360
Oceanobacillus iheyensis HTE831
Position: -469
Score: 4.30241
Sequence: TGTAATATTTTATGAAG
Position: -325
Score: 3.88836
Sequence: TGTTAATTTTTATCAAA
Locus tag: OB2615
Name: oppD
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: OB2614
Name: oppF
Funciton: Oligopeptide ABC transporter ATP-binding protein
Locus tag: OB2613
Name: appB
Funciton: Oligopeptide ABC transporter (permease)
Locus tag: OB2612
Name: oppC
Funciton: Oligopeptide ABC transporter permease
Locus tag: OB2611
Name: oppA
Funciton: Oligopeptide ABC transporter substrate-binding protein
oppD-oppF-appB-oppC-oppA -469 4.3 TGTAATATTTTATGAAG OB2615
-325 3.9 TGTTAATTTTTATCAAA