Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing nirA gene

Properties
Regulog: NtcA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Phylum: Cyanobacteria
Built upon 228 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -76
Score: 4.6631
Sequence: TGTTACATTAGCTACA
Locus tag: cce_1223
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: cce_1222
Name: nrtP
Funciton: Nitrate/nitrite transporter
nirA-nrtP -76 4.7 TGTTACATTAGCTACA cce_1223
Cyanothece sp. PCC 7425
Position: -123
Score: 4.48905
Sequence: TGTAACTTAATATACC
Locus tag: Cyan7425_4573
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: Cyan7425_4572
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: Cyan7425_4571
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: Cyan7425_4570
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: Cyan7425_4569
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nirA-nrtA-nrtB-nrtC-nrtD -123 4.5 TGTAACTTAATATACC Cyan7425_4573
Cyanothece sp. PCC 8801
Position: -75
Score: 4.55975
Sequence: TGTTACAATTAATACA
Locus tag: PCC8801_2468
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: PCC8801_2467
Name: nrtP
Funciton: Nitrate/nitrite transporter
nirA-nrtP -75 4.6 TGTTACAATTAATACA PCC8801_2468
Gloeobacter violaceus PCC 7421
Position: -146
Score: 4.0215
Sequence: TGTATCTGGGGTTACG
Locus tag: gvip212
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
nirA -146 4 TGTATCTGGGGTTACG gvip212
Microcystis aeruginosa NIES-843
Position: -190
Score: 4.08971
Sequence: TGTTACAGACAATACA
Locus tag: MAE_18410
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
nirA -190 4.1 TGTTACAGACAATACA MAE_18410
Synechococcus elongatus PCC 7942
Position: -220
Score: 4.87616
Sequence: TGTAGCAATTGCTACT
Position: -149
Score: 4.2705
Sequence: AGTATCAATGATTACT
Position: -80
Score: 4.39358
Sequence: TGTAGTTTCTGTTACC
Locus tag: Synpcc7942_1240
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: Synpcc7942_1239
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: Synpcc7942_1238
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: Synpcc7942_1237
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: Synpcc7942_1236
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: Synpcc7942_1235
Name: narB
Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-nrtD-narB -220 4.9 TGTAGCAATTGCTACT Synpcc7942_1240
-149 4.3 AGTATCAATGATTACT
-80 4.4 TGTAGTTTCTGTTACC
Synechococcus sp. JA-3-3Ab
Position: -72
Score: 3.93271
Sequence: TGTAACTGCCAATACC
Locus tag: CYA_0612
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: CYA_0613
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: CYA_0614
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: CYA_0615
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: CYA_0616
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nirA-nrtA-nrtB-nrtC-nrtD -72 3.9 TGTAACTGCCAATACC CYA_0612
Synechococcus sp. PCC 7002
Position: -111
Score: 4.02678
Sequence: CGTAGTTAACACTACA
Locus tag: SYNPCC7002_A1827
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
nirA -111 4 CGTAGTTAACACTACA SYNPCC7002_A1827
Synechocystis sp. PCC 6803
Position: -74
Score: 4.71265
Sequence: TGTAATTTACGTTACA
Locus tag: slr0898
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
nirA -74 4.7 TGTAATTTACGTTACA slr0898
Thermosynechococcus elongatus BP-1
Position: -82
Score: 4.62829
Sequence: AGTAGCAAAATTTACA
Locus tag: tlr1349
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: tlr1350
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: tlr1351
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: tlr1352
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: tlr1353
Name: tlr1353
Funciton: putative transposase
Locus tag: tlr1354
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: tlr1355
Name: narB
Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-tlr1353-nrtD-narB -82 4.6 AGTAGCAAAATTTACA tlr1349
Trichodesmium erythraeum IMS101
Position: -276
Score: 3.78019
Sequence: TGTATTTTTATATAGT
Position: -199
Score: 4.051
Sequence: TGTTATATAAGCTACG
Locus tag: Tery_1068
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: Tery_1069
Name: nrtP
Funciton: Nitrate/nitrite transporter
Locus tag: Tery_1070
Name: narB
Funciton: Nitrate reductase
nirA-nrtP-narB -276 3.8 TGTATTTTTATATAGT Tery_1068
-199 4.1 TGTTATATAAGCTACG