Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing nrtC gene

Properties
Regulog: NtcA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Phylum: Cyanobacteria
Built upon 228 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. PCC 7425
Position: -123
Score: 4.48905
Sequence: TGTAACTTAATATACC
Locus tag: Cyan7425_4573
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: Cyan7425_4572
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: Cyan7425_4571
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: Cyan7425_4570
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: Cyan7425_4569
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nirA-nrtA-nrtB-nrtC-nrtD -123 4.5 TGTAACTTAATATACC Cyan7425_4573
Cyanothece sp. PCC 8801
Position: -184
Score: 4.55736
Sequence: TGTAGCAAATAATACG
Position: -106
Score: 3.87815
Sequence: AGTATTTATAGACACA
Locus tag: PCC8801_4396
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: PCC8801_4395
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: PCC8801_4394
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: PCC8801_4393
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nrtA-nrtB-nrtC-nrtD -184 4.6 TGTAGCAAATAATACG PCC8801_4396
-106 3.9 AGTATTTATAGACACA
Microcystis aeruginosa NIES-843
Position: -177
Score: 4.18453
Sequence: TGTAACAATCTATACG
Locus tag: MAE_14810
Name: MAE_14810
Funciton: Hypothetical protein
Locus tag: MAE_14800
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: MAE_14790
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: MAE_14780
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: MAE_14770
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
MAE_14810-nrtA-nrtB-nrtC-nrtD -177 4.2 TGTAACAATCTATACG MAE_14810
Synechococcus elongatus PCC 7942
Position: -220
Score: 4.87616
Sequence: TGTAGCAATTGCTACT
Position: -149
Score: 4.2705
Sequence: AGTATCAATGATTACT
Position: -80
Score: 4.39358
Sequence: TGTAGTTTCTGTTACC
Locus tag: Synpcc7942_1240
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: Synpcc7942_1239
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: Synpcc7942_1238
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: Synpcc7942_1237
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: Synpcc7942_1236
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: Synpcc7942_1235
Name: narB
Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-nrtD-narB -220 4.9 TGTAGCAATTGCTACT Synpcc7942_1240
-149 4.3 AGTATCAATGATTACT
-80 4.4 TGTAGTTTCTGTTACC
Synechococcus sp. JA-3-3Ab
Position: -72
Score: 3.93271
Sequence: TGTAACTGCCAATACC
Locus tag: CYA_0612
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: CYA_0613
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: CYA_0614
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: CYA_0615
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: CYA_0616
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
nirA-nrtA-nrtB-nrtC-nrtD -72 3.9 TGTAACTGCCAATACC CYA_0612
Synechocystis sp. PCC 6803
Position: -96
Score: 3.91884
Sequence: AGTTACAAACTATACA
Locus tag: sll1450
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: sll1451
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: sll1452
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: sll1453
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: sll1454
Name: narB
Funciton: Nitrate reductase
nrtA-nrtB-nrtC-nrtD-narB -96 3.9 AGTTACAAACTATACA sll1450
Thermosynechococcus elongatus BP-1
Position: -82
Score: 4.62829
Sequence: AGTAGCAAAATTTACA
Locus tag: tlr1349
Name: nirA
Funciton: Nitrite reductase, ferredoxin dependent
Locus tag: tlr1350
Name: nrtA
Funciton: Nitrate/nitrite ABC transporter, substrate-binding protein
Locus tag: tlr1351
Name: nrtB
Funciton: Nitrate/nitrite ABC transporter, permease protein
Locus tag: tlr1352
Name: nrtC
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 1
Locus tag: tlr1353
Name: tlr1353
Funciton: putative transposase
Locus tag: tlr1354
Name: nrtD
Funciton: Nitrate/nitrite ABC transporter, ATP-binding protein 2
Locus tag: tlr1355
Name: narB
Funciton: Nitrate reductase
nirA-nrtA-nrtB-nrtC-tlr1353-nrtD-narB -82 4.6 AGTAGCAAAATTTACA tlr1349