Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing SYNPCC7002_A1954 gene

Properties
Regulog: NtcA - Cyanobacteria
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrogen assimilation
Effector: 2-oxoglutarate
Phylum: Cyanobacteria
Built upon 228 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cyanothece sp. ATCC 51142
Position: -210
Score: 4.72851
Sequence: TGTAGTCATAGTTACA
Position: -46
Score: 3.99929
Sequence: TTTATTTTCTGTTACA
Locus tag: cce_3327
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -210 4.7 TGTAGTCATAGTTACA cce_3327
-46 4 TTTATTTTCTGTTACA
Cyanothece sp. PCC 8801
Position: -198
Score: 4.75481
Sequence: TGTAATCATAGTTACA
Locus tag: PCC8801_3053
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -198 4.8 TGTAATCATAGTTACA PCC8801_3053
Microcystis aeruginosa NIES-843
Position: -75
Score: 3.74907
Sequence: TGTAAACTGGGAAACA
Locus tag: MAE_14410
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -75 3.7 TGTAAACTGGGAAACA MAE_14410
Nostoc sp. PCC 7120
Position: -250
Score: 4.63888
Sequence: TGTAGTGATAGCTACA
Locus tag: alr3982
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -250 4.6 TGTAGTGATAGCTACA alr3982
Synechococcus sp. PCC 7002
Position: -243
Score: 4.71813
Sequence: TGTAACAGGAGTTACA
Locus tag: SYNPCC7002_A1954
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -243 4.7 TGTAACAGGAGTTACA SYNPCC7002_A1954
Synechococcus sp. WH 8102
Position: -143
Score: 4.09161
Sequence: TGTAACTTTGGTTGCA
Locus tag: SYNW0246
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -143 4.1 TGTAACTTTGGTTGCA SYNW0246
Synechocystis sp. PCC 6803
Position: -214
Score: 4.69147
Sequence: TGTAATGATAGTTACA
Locus tag: slr1147
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -214 4.7 TGTAATGATAGTTACA slr1147
Thermosynechococcus elongatus BP-1
Position: -111
Score: 4.23592
Sequence: TGTAACCTATCTTACA
Locus tag: tlr0194
Name: tlr0194
Funciton: hypothetical protein
Locus tag: tlr0195
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
tlr0194-SYNPCC7002_A1954 -111 4.2 TGTAACCTATCTTACA tlr0194
Trichodesmium erythraeum IMS101
Position: -156
Score: 4.29664
Sequence: TGTAGTTATGGCTACC
Locus tag: Tery_3912
Name: SYNPCC7002_A1954
Funciton: putative two-component sensor histidine kinase
SYNPCC7002_A1954 -156 4.3 TGTAGTTATGGCTACC Tery_3912