Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing ybbC gene

Properties
Regulog: MurR - Bacillales
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: N-acetylmuramate utilization
Effector: N-acetylmuramate-6-phosphate
Phylum: Firmicutes
Built upon 3 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus licheniformis DSM 13
Position: -74
Score: 6.20815
Sequence: TTGAAATTATATTTCAG
Locus tag: BLi00191
Name: murQ
Funciton: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
Locus tag: BLi00190
Name: murR
Funciton: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
Locus tag: BLi00189
Name: ybbF
Funciton: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
Locus tag: BLi00188
Name: amiE
Funciton: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
Locus tag: BLi00187
Name: nagZ
Funciton: Beta--N-acetylglucosaminidase
Locus tag: BLi00186
Name: ybbC
Funciton: Hypothetical protein
murQ-murR-ybbF-amiE-nagZ-ybbC -74 6.2 TTGAAATTATATTTCAG BLi00191
Bacillus pumilus SAFR-032
Position: -90
Score: 6.15721
Sequence: CTGAAATATAATTTCAG
Locus tag: BPUM_0158
Name: murQ
Funciton: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
Locus tag: BPUM_0157
Name: murR
Funciton: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
Locus tag: BPUM_0156
Name: ybbF
Funciton: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
Locus tag: BPUM_0155
Name: amiE
Funciton: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
Locus tag: BPUM_0154
Name: nagZ
Funciton: Beta--N-acetylglucosaminidase
Locus tag: BPUM_0153
Name: ybbC
Funciton: Hypothetical protein
murQ-murR-ybbF-amiE-nagZ-ybbC -90 6.2 CTGAAATATAATTTCAG BPUM_0158
Bacillus subtilis subsp. subtilis str. 168
Position: -103
Score: 6.03376
Sequence: GTGAAATAAAATTTCAA
Locus tag: BSU01700
Name: murQ
Funciton: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
Locus tag: BSU01690
Name: murR
Funciton: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
Locus tag: BSU01680
Name: ybbF
Funciton: PTS system, MurNAc-specific IIBC component (EC 2.7.1.69)
Locus tag: BSU01670
Name: amiE
Funciton: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
Locus tag: BSU01660
Name: nagZ
Funciton: Beta--N-acetylglucosaminidase
Locus tag: BSU01650
Name: ybbC
Funciton: Hypothetical protein
murQ-murR-ybbF-amiE-nagZ-ybbC -103 6 GTGAAATAAAATTTCAA BSU01700