Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Orthologous regulated operons containing nirC gene

Properties
Regulog: Dnr - Ralstonia
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Denitrification
Effector: Nitric oxide
Phylum: Proteobacteria/beta
Built upon 9 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -123
Score: 4.53297
Sequence: GTTTGATGACAGTCAATC
Locus tag: RALTA_B2049
Name: nirS
Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: RALTA_B2050
Name: nirC
Funciton: cytochrome c, nitrite reductase associated (NirC)
Locus tag: RALTA_B2051
Name: nirF
Funciton: heme d1 biosynthesis protein (NirF)
Locus tag: RALTA_B2052
Name: nirD
Funciton: heme d1 biosynthesis protein (NirD)
Locus tag: RALTA_B2053
Name: nirG
Funciton: heme d1 biosynthesis protein (NirG)
Locus tag: RALTA_B2054
Name: nirH
Funciton: heme d1 biosynthesis protein (NirH)
Locus tag: RALTA_B2055
Name: nirJ
Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: RALTA_B2056
Name: nirN
Funciton: C-type cytochrome (NirN)
Locus tag: RALTA_B2057
Name: nirE
Funciton: Uroporphyrin-III C-methyltransferase
nirS-nirC-nirF-nirD-nirG-nirH-nirJ-nirN-nirE -123 4.5 GTTTGATGACAGTCAATC RALTA_B2049
Ralstonia eutropha H16
Position: -123
Score: 4.61314
Sequence: GTTTGATGCCAGTCAATT
Locus tag: H16_B2277
Name: nirS
Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: H16_B2278
Name: nirC
Funciton: cytochrome c, nitrite reductase associated (NirC)
Locus tag: H16_B2279
Name: nirF
Funciton: heme d1 biosynthesis protein (NirF)
Locus tag: H16_B2280
Name: nirD
Funciton: heme d1 biosynthesis protein (NirD)
Locus tag: H16_B2281
Name: nirG
Funciton: heme d1 biosynthesis protein (NirG)
Locus tag: H16_B2282
Name: nirH
Funciton: heme d1 biosynthesis protein (NirH)
Locus tag: H16_B2283
Name: nirJ
Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: H16_B2284
Name: nirN
Funciton: C-type cytochrome (NirN)
Locus tag: H16_B2285
Name: nirE
Funciton: Uroporphyrin-III C-methyltransferase
nirS-nirC-nirF-nirD-nirG-nirH-nirJ-nirN-nirE -123 4.6 GTTTGATGCCAGTCAATT H16_B2277
Ralstonia eutropha JMP134
Position: -91
Score: 5.17073
Sequence: CGTTGACAACAGTCAACC
Locus tag: Reut_B5010
Name: null
Funciton: Nitrite reductase NirS (Cytochrome cd1)
Locus tag: Reut_B5011
Name: null
Funciton: cytochrome c, class I
Locus tag: Reut_B5012
Name: null
Funciton: cytochrome c, nitrite reductase associated (NirC)
Locus tag: Reut_B5013
Name: null
Funciton: heme d1 biosynthesis protein (NirF)
Locus tag: Reut_B5014
Name: null
Funciton: heme d1 biosynthesis protein (NirD)
Locus tag: Reut_B5015
Name: null
Funciton: heme d1 biosynthesis protein (NirG)
Locus tag: Reut_B5016
Name: null
Funciton: heme d1 biosynthesis protein (NirH)
Locus tag: Reut_B5017
Name: null
Funciton: heme d1 biosynthesis protein (NirJ)
Locus tag: Reut_B5018
Name: null
Funciton: C-type cytochrome (NirN)
Locus tag: Reut_B5019
Name: null
Funciton: Uroporphyrin-III C-methyltransferase
Reut_B5010-Reut_B5011-Reut_B5012-Reut_B5013-Reut_B5014-Reut_B5015-Reut_B5016-Reut_B5017-Reut_B5018-Reut_B5019 -91 5.2 CGTTGACAACAGTCAACC Reut_B5010