Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Leptothrix cholodnii SP-6

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF Daci_3836 1 1
TF FadP Fatty acid degradation 3 3
TF GguR Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization 4 7
TF GntR Gluconate Gluconate utilization 2 4
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 3
TF HrcA Heat shock Heat shock response 2 2
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 1
TF LexA DNA damage SOS response 4 4
TF LiuQ Branched-chain amino acid degradation 2 4
TF LiuR Branched-chain amino acid degradation 4 7
TF MdcY Malonate metabolism 2 2
TF ModE3 Tungsten Tungsten homeostasis 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 4
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 3 3
TF PdxW2 Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF SdhR Tricarboxylic acid cycle 4 4
TF YdcR 2 2
TF Zur2 Zinc ion, (Zn2+) Zinc homeostasis 1 1
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 2 2
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
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