Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Variovorax paradoxus S110

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF Aave_3430 2 2
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 1 1
TF CueR Copper ion, (Cu+) Copper resistance 3 3
TF Daci_0595 Metabolite transport 1 1
TF Daci_3053 Glycolate utilization; Lactate utilization 2 4
TF Daci_3836 1 1
TF FadP Fatty acid degradation 4 4
TF FdsR Formate Formate oxydation 2 2
TF GabR2 Gamma-aminobutyric acid Gamma-aminobutyrate utilization 1 1
TF GguR Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization 3 4
TF GntR Gluconate Gluconate utilization 2 6
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 2 3
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 2
TF LexA DNA damage SOS response 6 7
TF LiuR Branched-chain amino acid degradation 1 1
TF MetR Homocysteine Methionine biosynthesis 2 4
TF ModE2 Molybdate Molybdopterin biosynthesis 1 1
TF ModE3 Tungsten Tungsten homeostasis 1 1
TF NorR Nitric oxide Nitrosative stress response 2 5
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 2 3
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 5 5
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 2 3
TF PdxW Pyridoxal-5-phosphate Pyridoxine/pyridoxal homeostasis 1 1
TF RbsR Ribose Ribose utilization 1 1
TF SdhR Tricarboxylic acid cycle 3 3
TF SoxR Paraquat Superoxide stress response 2 2
TF TauR Taurine Taurine utilization 2 2
TF UxuR2 Glucuronate utilization; Galacturonate utilization 5 9
TF UxuR3 Glucuronate utilization 1 2
TF VanR Vanillate Vanillate utilization 1 2
TF Vapar_1337 1 1
TF Vapar_5644 1 1
TF YdcR 1 1
TF YrdX 1 4
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 2 2
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
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