Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Comamonas testosteroni KF-1

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF Aave_3430 2 2
TF Aave_3515 2 3
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 5 5
TF CueR Copper ion, (Cu+) Copper resistance 1 1
TF Daci_0595 Metabolite transport 2 2
TF Daci_1890 1 1
TF Daci_3836 1 1
TF FadP Fatty acid degradation 3 3
TF GguR Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization 3 3
TF GntR Gluconate Gluconate utilization 2 4
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 2 2
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 4 5
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 2
TF LexA DNA damage SOS response 5 6
TF LiuR Branched-chain amino acid degradation 5 9
TF LldR L-lactate Lactate utilization 1 2
TF MerR Mercury ion, (Hg2+) Mercury resistance 1 1
TF MetR Homocysteine Methionine biosynthesis 2 2
TF ModE Molybdate Molybdenum homeostasis 2 2
TF ModE2 Molybdate Molybdopterin biosynthesis 2 2
TF NadQ NAD biosynthesis 2 3
TF NorR Nitric oxide Nitrosative stress response 2 6
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 4 6
TF PdxR Pyridoxine/pyridoxal homeostasis 1 1
TF SdhR Tricarboxylic acid cycle 3 3
TF SoxR Paraquat Superoxide stress response 2 2
TF TauR Taurine Taurine utilization 3 3
TF UreR 2 4
TF VanR Vanillate Vanillate utilization 2 3
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 2 2
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 3 3
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