Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Lactococcus lactis subsp. lactis Il1403

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AdcR Zinc ion, (Zn2+) Zinc homeostasis 2 2
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 6 15
TF BirA Biotin Biotin biosynthesis 2 2
TF BusR Betaine Betaine utilization 1 1
TF CcpA Fructose-1,6-bisphosphate; HPr, phosphocarrier protein Global catabolite repression 31 36
TF CcpB Sugar utilization 1 1
TF CmbR O-acetyl-L-serine Cysteine metabolism 9 10
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 13 15
TF CopR Copper ion, (Cu2+) Copper homeostasis 5 6
TF CtsR Heat shock Heat shock response 5 5
TF FabT Long-chain acyl-ACP Fatty acid biosynthesis 3 3
TF FlpA Oxygen Heavy metal resistance 2 2
TF FlrR Drug resistance 2 2
TF FruR Fructose-6-phosphate Fructose utilization 1 3
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 4
TF GntR1 Gluconate Gluconate utilization 3 3
TF HomR O-acetyl-L-serine Methionine metabolism; Cysteine metabolism 2 2
TF HrcA Heat shock Heat shock response 3 4
TF MalR Maltose Maltose utilization; Maltodextrin utilization 2 2
TF MleR L-malate Malate utilization 1 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 2 2
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF MurR N-acetylmuramate-6-phosphate N-acetylmuramate utilization 1 2
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 4
TF NmlR Methylglyoxal; Formaldehyde; Nitric oxide Carbonyl stress response 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 4
TF PadR Ferulic acid; p-Coumaric acid Phenolic acid stress response 1 1
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Iron homeostasis; Manganese homeostasis; Oxidative stress response 1 2
TF PipR Phage infection protein 2 3
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 16 18
TF RbsR2 Ribose Ribose utilization 1 1
TF Rex NADH Energy metabolism 7 9
TF TreR (RgrA) Trehalose-6-phosphate Trehalose utilization 2 2
TF UxuR Glucuronate Glucuronate utilization 2 2
TF YxeR Antibiotic resistance 1 1
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 2 2
RNA L10_leader Ribosome biogenesis 1 1
RNA L13_leader Ribosome biogenesis 1 1
RNA L20_leader Ribosome biogenesis 1 1
RNA L21_leader Ribosome biogenesis 1 1
RNA Lysine Lysine Lysine biosynthesis 2 2
RNA Purine Adenine; Guanine Purine metabolism 1 1
RNA PyrR PyrR Pyrimidine metabolism 4 4
RNA S15 Ribosome biogenesis 1 1
RNA T-box(Ala) Ala-tRNA Amino acid metabolism 1 1
RNA T-box(Asp) Asp-tRNA Amino acid metabolism 1 1
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(His) His-tRNA Amino acid metabolism 1 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA T-box(Met) Met-tRNA Amino acid metabolism 1 1
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Ser) Ser-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 1 1
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 2 2
RNA T-box(Val) Val-tRNA Amino acid metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
RNA preQ1-II Pre-queuosine Queuosine biosynthesis 1 1
RNA ykoK Magnesium ion, (Mg2+) Magnesium homeostasis 1 1
RNA yybP-ykoY 1 1
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD