Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Verminephrobacter eiseniae EF01-2

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF Aave_3515 2 2
TF Bpro_5109 Sugar utilization 1 1
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 2 2
TF Daci_3836 2 2
TF EutR Ectoine utilization 3 3
TF FadP Fatty acid degradation 4 4
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 3
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 1 1
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 1
TF LexA DNA damage SOS response 3 4
TF MetR Homocysteine Methionine biosynthesis 2 2
TF ModE Molybdate Molybdenum homeostasis 1 1
TF ModE2 Molybdate Molybdopterin biosynthesis 1 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 2 3
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 1 1
TF PhnR2 2-aminoethylphosphonate Phosphonoacetate utilization; Phosphonate utilization; 2-aminoethylphosphonate utilization 2 2
TF PrpR 2-methylcitrate Methylcitrate utilization 1 2
TF SdhR Tricarboxylic acid cycle 3 3
TF TauR Taurine Taurine utilization 3 3
TF UxuR2 Glucuronate utilization; Galacturonate utilization 3 3
TF UxuR3 Glucuronate utilization 1 1
TF VanR Vanillate Vanillate utilization 1 2
TF Vapar_5644 1 1
TF Veis_0044 3 3
TF Veis_4721 1 1
TF Zur2 Zinc ion, (Zn2+) Zinc homeostasis 2 2
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 1 1
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