Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Methylibium petroleiphilum PM1

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 2 2
TF CueR Copper ion, (Cu+) Copper resistance 5 5
TF Daci_0595 Metabolite transport 1 1
TF Daci_3836 2 2
TF FadP Fatty acid degradation 4 4
TF FdsR Formate Formate oxydation 2 2
TF GguR Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization 2 3
TF GudR Glucarate utilization 2 3
TF HrcA Heat shock Heat shock response 2 2
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 1
TF LexA DNA damage SOS response 8 9
TF LiuQ Branched-chain amino acid degradation 2 4
TF MdcY Malonate metabolism 2 2
TF MerR Mercury ion, (Hg2+) Mercury resistance 1 1
TF ModE3 Tungsten Tungsten homeostasis 1 1
TF NikR Nickel ion, (Ni2+) Nickel homeostasis 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 4
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 1 1
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 2 2
TF PdxQ3 Metabolite transport; Pyridoxine/pyridoxal homeostasis 1 1
TF PdxR3 Pyridoxine/pyridoxal homeostasis 2 4
TF PhnF Phosphonate utilization 2 2
TF SdhR Tricarboxylic acid cycle 3 3
TF YdcR 1 1
TF YrdX 1 3
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 2 2
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 2 2
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