Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Streptococcus uberis 0140J

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AdcR Zinc ion, (Zn2+) Zinc homeostasis 5 5
TF AgaR N-acetylgalactosamine N-acetylgalactosamine utilization 2 2
TF AgaR2 N-acetylgalactosamine N-acetylgalactosamine utilization 1 1
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 7 12
TF BfrR Fructooligosaccharides utilization 1 2
TF BirA Biotin Biotin biosynthesis 1 1
TF CcpA Fructose-1,6-bisphosphate; HPr, phosphocarrier protein Global catabolite repression 61 65
TF CcpN Gluconeogenesis 1 1
TF CelR CelB, cellobiose-specific PTS component EIIB; HPr, phosphocarrier protein Cellobiose utilization 1 2
TF CmbR O-acetyl-L-serine Cysteine metabolism 4 6
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 17 17
TF CopR Copper ion, (Cu2+) Copper homeostasis 1 2
TF CtsR Heat shock Heat shock response 4 4
TF FabT Long-chain acyl-ACP Fatty acid biosynthesis 3 3
TF FruR Fructose-6-phosphate Fructose utilization 1 2
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 3 3
TF GutR HPr, phosphocarrier protein; GutB, sorbitol-specific PTS EIIB component Sorbitol utilization 1 1
TF HrcA Heat shock Heat shock response 3 3
TF LacR D-galactose-6-phosphate Lactose utilization; Galactose utilization 4 6
TF MalR Maltose Maltose utilization; Maltodextrin utilization 4 4
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 4 5
TF MtaR Homocysteine Methionine metabolism 3 3
TF MtlR MtlA, mannitol-specific enzyme IICB PTS component; HPr, phosphocarrier protein Mannitol utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 5
TF NanR N-acetylneuraminic acid Sialic acid utilization 1 2
TF NiaR Niacin NAD biosynthesis 1 1
TF NmlR Methylglyoxal; Formaldehyde; Nitric oxide Carbonyl stress response 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 4
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Iron homeostasis; Manganese homeostasis; Oxidative stress response 6 7
TF PflR Formate metabolism 3 3
TF PipR Phage infection protein 2 4
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 5 6
TF RbsR2 Ribose Ribose utilization 1 1
TF Rex NADH Energy metabolism 10 14
TF SAG1910 unknown 2 4
TF SPy1285 Transport 3 3
TF ScrR Sucrose-6-phosphate Sucrose utilization 2 2
TF SgaR HPr, phosphocarrier protein; SgaB, ascorbate-specific PTS system EIIB component Ascorbate utilization 2 2
TF SgaR2 SgaB2, ascorbate-specific PTS system, EIIB component; HPr, phosphocarrier protein Ascorbate utilization 1 1
TF TreR Trehalose-6-phosphate Trehalose utilization 2 2
TF YjdR Multidrug resistance 2 3
TF YwzG Transport 1 2
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA Glycine Glycine Glycine metabolism 1 2
RNA L10_leader Ribosome biogenesis 1 1
RNA L13_leader Ribosome biogenesis 1 1
RNA L19_leader Ribosome biogenesis 1 1
RNA L20_leader Ribosome biogenesis 1 1
RNA L21_leader Ribosome biogenesis 1 1
RNA Purine Adenine; Guanine Purine metabolism 1 1
RNA PyrR PyrR Pyrimidine metabolism 3 3
RNA S15 Ribosome biogenesis 1 1
RNA T-box(Ala) Ala-tRNA Amino acid metabolism 1 1
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Ser) Ser-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 1 1
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 1 1
RNA T-box(Val) Val-tRNA Amino acid metabolism 1 1
RNA THF Tetrahydrofolate Folate metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 1 1
RNA preQ1-II Pre-queuosine Queuosine biosynthesis 1 1
RNA yybP-ykoY 1 1
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