Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for TetR transcription factor family

General statistics
TF regulogs 130
TF regulons 737
TF binding sites 3017

TetR family of transcription factors is the third most frequently occurring regulator family in Bacteria [20595046]. This family includes diverse transcriptional repressors that control genes involved in multidrug resistance, different catabolic pathways, biosynthesis of antibiotics, osmotic stress, and pathogenicity [15944459]. TetR proteins serve as chemical sensors to monitor the cellular environment and are particularly abundant in microbes exposed to environmental changes, e.g. in soil microorganisms and methanogenic bacteria, but not in intracellular pathogens [15944459]. In general, members of the TetR family bind their target operators upstream of regulated genes and thus block their expression. more

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Actinobacteria AcnR - Corynebacteriaceae 8 (8) 8
Actinobacteria AcnR - Frankineae/Propionibacterineae/Pseudonocardiaceae 4 (9) 9
Actinobacteria AcnR - Mycobacteriaceae 9 (9) 15
Actinobacteria AcnR - Nocardiaceae 4 (4) 8
Chloroflexi AcrR - Chloroflexia 4 (5) 7
Proteobacteria/gamma AcrR - Enterobacteriales 12 (12) 24
Actinobacteria AmtR - Corynebacteriaceae 4 (8) 42
Actinobacteria AmtR - Micrococcineae 3 (14) 5
Actinobacteria AmtR - Mycobacteriaceae 3 (9) 6
Actinobacteria AmtR - Nocardiaceae 4 (4) 7
Actinobacteria AmtR - Streptomycetaceae 2 (4) 6
Proteobacteria/gamma BetI - Enterobacteriales 7 (12) 14
Proteobacteria/gamma BetI - Shewanellaceae 7 (16) 8
Actinobacteria BgrT1 - Bifidobacteriaceae 5 (10) 10
Actinobacteria BgrT2 - Bifidobacteriaceae 5 (10) 9
Actinobacteria BgrT3 - Bifidobacteriaceae 3 (10) 8
Actinobacteria BgrT4 - Bifidobacteriaceae 2 (10) 8
Actinobacteria BgrT5 - Bifidobacteriaceae 2 (10) 2
Actinobacteria BgrT6 - Bifidobacteriaceae 1 (10) 4
Actinobacteria BgrT7 - Bifidobacteriaceae 1 (10) 9
Actinobacteria BgrT8 - Bifidobacteriaceae 1 (10) 1
Actinobacteria BioQ - Actinomycetales 19 (19) 86
Actinobacteria BioQ - Corynebacteriaceae 7 (8) 24
Actinobacteria BioQ - Frankineae/Propionibacterineae/Pseudonocardiaceae 3 (9) 11
Actinobacteria BioQ - Micrococcineae 5 (14) 17
Actinobacteria BioQ - Mycobacteriaceae 5 (9) 16
Actinobacteria BioQ - Nocardiaceae 4 (4) 25
Proteobacteria/gamma CalR - Shewanellaceae 16 (16) 16
Chloroflexi Caur_3401 - Chloroflexia 4 (5) 4
Actinobacteria Cg0454 - Corynebacteriaceae 8 (8) 19
Actinobacteria Cg1053 - Corynebacteriaceae 5 (8) 5
Proteobacteria/delta DVU0057 - Desulfovibrionales 3 (10) 3
Proteobacteria/delta DVU0436 - Desulfovibrionales 2 (10) 2
Proteobacteria/delta DVU1760 - Desulfovibrionales 1 (10) 4
Proteobacteria/delta DVU2819 - Desulfovibrionales 1 (10) 1
Proteobacteria/delta Dbac_0104 - Desulfovibrionales 3 (10) 6
Proteobacteria/gamma DesT - Pseudomonadaceae 6 (8) 13
Proteobacteria/gamma FabR - Alteromonadales 9 (9) 45
Proteobacteria/gamma FabR - Enterobacteriales 12 (12) 40
Proteobacteria/gamma FabR - Moraxellaceae 2 (4) 6
Proteobacteria/gamma FabR - Oceanospirillales/Alteromonadales 3 (12) 8
Proteobacteria/gamma FabR - Pasteurellales 8 (9) 19
Proteobacteria/gamma FabR - Psychromonadaceae/Aeromonadales 4 (6) 27
Proteobacteria/gamma FabR - Shewanellaceae 16 (16) 118
Proteobacteria/gamma FabR - Vibrionales 10 (10) 67
Proteobacteria/gamma FabR - Xanthomonadales 3 (4) 6
Proteobacteria/gamma FabR2 - Oceanospirillales/Alteromonadales 3 (12) 6
Proteobacteria/gamma FabR2 - Pseudomonadaceae 2 (8) 6
Proteobacteria/beta FadP - Burkholderia 8 (8) 63
Proteobacteria/beta FadP - Comamonadaceae 11 (11) 46
Proteobacteria/beta FadP - Ralstonia 6 (6) 85
Firmicutes FadR - Bacillales 10 (11) 48
Actinobacteria FasR - Corynebacteriaceae 5 (8) 12
Firmicutes FatR - Bacillales 5 (11) 5
Firmicutes FatR - Lactobacillaceae 3 (15) 5
Firmicutes FlrR - Lactobacillaceae 3 (15) 6
Firmicutes FlrR - Streptococcaceae 2 (15) 3
Firmicutes IcaR - Staphylococcaceae 2 (7) 4
Actinobacteria Jk1423 - Corynebacteriaceae 3 (8) 6
Firmicutes LBA1638 - Lactobacillaceae 4 (15) 4
Firmicutes LSEI_0081 - Lactobacillaceae 3 (15) 7
Proteobacteria/beta LiuQ - Burkholderia 8 (8) 32
Proteobacteria/beta LiuQ - Comamonadaceae 2 (11) 8
Proteobacteria/beta LiuQ - Ralstonia 4 (6) 14
Firmicutes LmrA - Bacillales 2 (11) 5
Actinobacteria McbR - Corynebacteriaceae 8 (8) 162
Actinobacteria PaaR - Actinobacteria 17 (17) 85
Actinobacteria PaaR - Corynebacteriaceae 1 (8) 14
Actinobacteria PaaR - Frankineae/Propionibacterineae/Pseudonocardiaceae 4 (9) 14
Actinobacteria PaaR - Micrococcineae 6 (14) 38
Actinobacteria PaaR - Mycobacteriaceae 1 (9) 8
Actinobacteria PaaR - Nocardiaceae 4 (4) 22
Actinobacteria PaaR - Streptomycetaceae 4 (4) 24
Alphaproteobacteria PaaR - Rhizobiales 3 (15) 14
Alphaproteobacteria PaaR - Rhodobacterales 5 (15) 13
Bacteroidetes PaaR - Flavobacteria 6 (6) 8
Betaproteobacteria PaaR - Burkholderia 8 (8) 27
Betaproteobacteria PaaR - Comamonadaceae 5 (11) 13
Betaproteobacteria PaaR - Ralstonia 6 (6) 18
Deinococcus-Thermus PaaR - Deinococcus-Thermus 2 (5) 4
Proteobacteria/Beta PaaR - Various betaproteobacteria 2 (12) 4
Deinococcus-Thermus PaaR2 - Deinococcus-Thermus 3 (5) 26
Firmicutes PipR - Streptococcaceae 15 (15) 48
Proteobacteria/alpha PsrA - Caulobacterales 4 (4) 70
Proteobacteria/alpha PsrA - Rhizobiales 3 (15) 12
Proteobacteria/beta PsrA - Burkholderia 8 (8) 16
Proteobacteria/beta PsrA - Ralstonia 6 (6) 9
Proteobacteria/beta PsrA - Various betaproteobacteria 5 (12) 34
Proteobacteria/gamma PsrA - Alteromonadales 4 (9) 26
Proteobacteria/gamma PsrA - Oceanospirillales/Alteromonadales 8 (12) 67
Proteobacteria/gamma PsrA - Pseudomonadaceae 8 (8) 69
Proteobacteria/gamma PsrA - Psychromonadaceae/Aeromonadales 3 (6) 19
Proteobacteria/gamma PsrA - Shewanellaceae 16 (16) 295
Proteobacteria/gamma PsrA - Vibrionales 8 (10) 49
Proteobacteria/gamma PsrA - Xanthomonadales 3 (4) 7
Actinobacteria QacR - Corynebacteriaceae 5 (8) 5
Firmicutes QdoR - Bacillales 4 (11) 7
Proteobacteria/alpha RutR - Caulobacterales 2 (4) 4
Proteobacteria/alpha RutR - Rhizobiales 9 (15) 44
Proteobacteria/alpha RutR - Rhodobacterales 13 (15) 62
Proteobacteria/alpha RutR - Rhodospirillales 1 (9) 2
Proteobacteria/beta RutR - Burkholderia 7 (8) 12
Proteobacteria/beta RutR - Ralstonia 4 (6) 4
Proteobacteria/gamma RutR - Alteromonadales 4 (9) 19
Proteobacteria/gamma RutR - Enterobacteriales 7 (12) 13
Proteobacteria/gamma RutR - Moraxellaceae 2 (4) 8
Proteobacteria/gamma RutR - Oceanospirillales/Alteromonadales 8 (12) 32
Proteobacteria/gamma RutR - Pseudomonadaceae 7 (8) 29
Proteobacteria/gamma RutR - Psychromonadaceae/Aeromonadales 1 (6) 4
Proteobacteria/gamma RutR - Vibrionales 2 (10) 4
Proteobacteria/gamma RutR2 - Alteromonadales 1 (9) 2
Proteobacteria/gamma RutR2 - Pseudomonadaceae 4 (8) 7
Proteobacteria/gamma RutR3 - Pseudomonadaceae 7 (8) 23
Proteobacteria/gamma RutR4 - Pseudomonadaceae 2 (9) 4
Proteobacteria/gamma SO0193 - Shewanellaceae 10 (16) 11
Proteobacteria/gamma SO1393 - Shewanellaceae 5 (16) 20
Proteobacteria/gamma SO1415 - Shewanellaceae 6 (16) 18
Proteobacteria/gamma SO1578 - Shewanellaceae 8 (16) 24
Proteobacteria/gamma SO1703 - Shewanellaceae 11 (16) 11
Proteobacteria/gamma SO3277 - Shewanellaceae 16 (16) 64
Proteobacteria/gamma SO3393 - Shewanellaceae 14 (16) 78
Proteobacteria/gamma SO3494 - Shewanellaceae 9 (16) 31
Proteobacteria/gamma SO3627 - Shewanellaceae 2 (16) 4
Proteobacteria/gamma SO4326 - Shewanellaceae 8 (16) 8
Proteobacteria/gamma SO4468 - Shewanellaceae 11 (16) 22
Firmicutes SczA - Streptococcaceae 7 (15) 18
Thermotogae TM1030 - Thermotogales 6 (11) 6
Firmicutes YhgD - Bacillales 9 (11) 17
Firmicutes YxeR - Lactobacillaceae 11 (15) 20
Firmicutes YxeR - Streptococcaceae 2 (15) 2