Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for ROK transcription factor family

General statistics
TF regulogs 28
TF regulons 159
TF binding sites 665

ROK family of transcription factors includes sugar-responsive repressors of various carbohydrate utilization pathways [20512568, 23209028]. Induction of ROK-family repressors occurs through binding of sugar of sugar-phosphate co-inducer and dissociation of regulator from DNA sites. ROK-family regulators share an N-terminal winged HTH DNA-binding domain (SSF46785) and a characteristic C-terminal ligand binding domain (PF00480) that is similar to ROK-family sugar kinases.

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Actinobacteria BDP_2071 - Bifidobacteriaceae 2 (10) 4
Actinobacteria BLA_0357 - Bifidobacteriaceae 9 (10) 15
Thermotogae BglR - Thermotogales 6 (11) 7
Firmicutes CelQ - Streptococcaceae 4 (15) 10
Thermotogae ChiR - Thermotogales 8 (11) 8
Actinobacteria FruR - Bifidobacteriaceae 9 (10) 11
Thermotogae GluR - Thermotogales 4 (11) 7
Thermotogae IolR - Thermotogales 4 (11) 4
Thermotogae ManR - Thermotogales 5 (11) 9
Proteobacteria/gamma NagC - Enterobacteriales 12 (12) 68
Proteobacteria/gamma NagC - Oceanospirillales/Alteromonadales 1 (12) 5
Proteobacteria/gamma NagC - Pasteurellales 2 (9) 16
Proteobacteria/gamma NagC - Psychromonadaceae/Aeromonadales 6 (6) 16
Proteobacteria/gamma NagC - Vibrionales 10 (10) 199
Actinobacteria NagR - Bifidobacteriaceae 4 (10) 28
Chloroflexi NagR - Chloroflexia 4 (5) 5
Bacteroidetes NanR - Bacteroidaceae 11 (11) 59
Actinobacteria RafR - Bifidobacteriaceae 7 (10) 17
Actinobacteria SsuR - Corynebacteriaceae 2 (8) 6
Thermotogae TreR - Thermotogales 10 (11) 19
Actinobacteria XylR - Bifidobacteriaceae 7 (10) 24
Firmicutes XylR - Bacillales 9 (11) 28
Firmicutes XylR - Clostridia-1 3 (8) 20
Firmicutes XylR - Clostridia-2 1 (3) 3
Firmicutes XylR - Enterococcaceae 1 (2) 4
Firmicutes XylR - Lactobacillaceae 4 (15) 15
Proteobacteria/alpha XylR - Rhizobiales 8 (15) 19
Thermotogae XylR - Thermotogales 6 (11) 39