Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for LysR transcription factor family

General statistics
TF regulogs 60
TF regulons 443
TF binding sites 1612

LysR family of transcription factors represents the most abundant family of regulators in bacteria [19047729]. The LysR family regulators control diverse biological pathways such as central metabolism, cell division, quorum sensing, virulence, motility, nitrogen fixation, oxidative stress responses, toxin production, attachment and secretion. End-product or an intermediate of LysR-regulated pathway usually serves as a co-inducer thus providing feedback control loop. Regulators from the LysR family act as either activators or repressors, and often are transcribed divergently with one of the regulated genes [8257110]. more

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Proteobacteria/gamma AbgR - Enterobacteriales 4 (12) 12
Firmicutes AlsR - Bacillales 4 (11) 8
Proteobacteria/Alpha Bll2166 - Rhizobiales 4 (15) 9
Firmicutes BsdA - Bacillales 3 (11) 6
Chloroflexi Caur_1779 - Chloroflexia 2 (5) 4
Cyanobacteria CcmR - Cyanobacteria 11 (14) 72
Firmicutes CcpC - Bacillales 6 (11) 12
Actinobacteria Cg3239 - Corynebacteriaceae 4 (8) 8
Firmicutes CitR - Bacillales 4 (11) 8
Firmicutes CmbR - Streptococcaceae 15 (15) 104
Firmicutes CysL - Bacillales 8 (11) 28
Proteobacteria/delta DVU0309 - Desulfovibrionales 4 (10) 14
Gammaproteobacteria GcvA - Enterobacteriales 12 (12) 34
Proteobacteria/gamma GcvA - Shewanellaceae 16 (16) 108
Firmicutes GltC - Bacillales 6 (11) 20
Firmicutes GltC - Staphylococcaceae 6 (7) 24
Firmicutes GltC2 - Bacillales 3 (11) 6
Firmicutes GltR - Bacillales 2 (11) 5
Proteobacteria/Alpha GulR - Rhizobiales 3 (15) 13
Proteobacteria/Beta GulR - Ralstonia 2 (6) 6
Proteobacteria/Gamma GulR - Xanthomonadales 1 (4) 2
Proteobacteria/Gamma HmgQ - Pseudomonadaceae 1 (8) 2
Proteobacteria/Gamma HmgQ - Shewanellaceae 16 (16) 33
Firmicutes HomR - Streptococcaceae 10 (15) 24
Proteobacteria/delta HrsM - Desulfovibrionales 7 (10) 16
Firmicutes HutR - Staphylococcaceae 5 (7) 12
Proteobacteria/gamma IlvY - Enterobacteriales 12 (12) 46
Proteobacteria/gamma IlvY - Shewanellaceae 16 (16) 64
Gammaproteobacteria LeuO - Enterobacteriales 10 (12) 21
Proteobacteria/gamma LldR - Shewanellaceae 14 (16) 14
Actinobacteria LysG - Corynebacteriaceae 4 (8) 8
Gammaproteobacteria LysR - Enterobacteriales 12 (12) 24
Proteobacteria/Alpha MetR - Rhodobacterales 13 (15) 30
Proteobacteria/Beta MetR - Alcaligenaceae 3 (3) 13
Proteobacteria/Beta MetR - Burkholderia 7 (8) 18
Proteobacteria/Beta MetR - Ralstonia 6 (6) 12
Proteobacteria/Gamma MetR - Alteromonadales 4 (9) 15
Proteobacteria/Gamma MetR - Enterobacteriales 12 (12) 140
Proteobacteria/Gamma MetR - Oceanospirillales/Alteromonadales 12 (12) 46
Proteobacteria/Gamma MetR - Pasteurellales 8 (9) 40
Proteobacteria/Gamma MetR - Pseudomonadaceae 8 (8) 44
Proteobacteria/Gamma MetR - Psychromonadaceae/Aeromonadales 5 (6) 13
Proteobacteria/Gamma MetR - Shewanellaceae 16 (16) 117
Proteobacteria/Gamma MetR - Vibrionales 10 (10) 57
Proteobacteria/beta MetR - Comamonadaceae 5 (11) 13
Proteobacteria/beta MetR - Various betaproteobacteria 8 (12) 19
Proteobacteria/gamma MetR - Xanthomonadales 3 (4) 6
Firmicutes MleR - Lactobacillaceae 11 (15) 21
Firmicutes MleR - Streptococcaceae 6 (15) 8
Firmicutes MtaR - Lactobacillaceae 1 (15) 2
Firmicutes MtaR - Streptococcaceae 13 (15) 72
Proteobacteria/gamma NhaR - Enterobacteriales 11 (12) 11
Proteobacteria/gamma NhaR - Shewanellaceae 16 (16) 33
Cyanobacteria NtcB - Cyanobacteria 12 (14) 44
Proteobacteria/gamma PflR - Shewanellaceae 10 (16) 35
Cyanobacteria PirR - Cyanobacteria 3 (14) 11
Actinobacteria QsuR - Corynebacteriaceae 2 (8) 4
Proteobacteria/gamma XapR - Enterobacteriales 4 (12) 5
Firmicutes YtlI - Bacillales 2 (11) 8
Firmicutes YwbI - Bacillales 5 (11) 8