Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for LacI transcription factor family

General statistics
TF regulogs 363
TF regulons 1421
TF binding sites 8003

LacI family of transcription factors includes widespread bacterial regulators of carbohydrate catabolic pathways (e.g. pathways utilizing lactose, galactose, ribose, fructose, gluconate, maltose etc) [8543068]. In most cases, effectors of LacI-family regulators are sugars or their phosphorylated counterparts. The global catabolite control regulator CcpA controls major sugar catabolic pathways in Firmicutes in response to glucose availability [22900538]. The purine repressor PurR in Enterobacteria controls the nucleotide uptake and biosynthesis genes in response to hypoxanthine or guanine [21572102]. more

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Actinobacteria AAur_3503 - Micrococcineae 2 (14) 4
Actinobacteria AAur_4078 - Micrococcineae 4 (14) 21
Firmicutes ABC1167 - Bacillales 1 (11) 2
Proteobacteria/Alpha AZL_a08610 - Rhodospirillales 1 (9) 4
Actinobacteria AbfR - Bifidobacteriaceae 2 (10) 3
Proteobacteria/Alpha AduR - Rhizobiales 4 (15) 4
Proteobacteria/Alpha AfrR - Rhizobiales 6 (15) 19
Proteobacteria/Alpha AfrR - Rhodobacterales 1 (15) 3
Proteobacteria/Alpha AglR - Rhizobiales 7 (15) 24
Proteobacteria/Alpha AglR - Rhodobacterales 5 (15) 14
Firmicutes AlsR - Listeriaceae 2 (4) 12
Firmicutes AlsR - Streptococcaceae 1 (15) 2
Actinobacteria AouR - Bifidobacteriaceae 3 (10) 11
Actinobacteria AraQ - Bifidobacteriaceae 10 (10) 83
Actinobacteria Arth_2426 - Micrococcineae 5 (14) 12
Proteobacteria/gamma AscG - Enterobacteriales 7 (12) 28
Proteobacteria/Alpha Atu5239 - Rhizobiales 2 (15) 5
Actinobacteria BBNG_01789 - Bifidobacteriaceae 1 (10) 2
Firmicutes BC0230 - Bacillales 1 (11) 2
Firmicutes BC5402 - Bacillales 1 (11) 2
Actinobacteria BDP_1267 - Bifidobacteriaceae 2 (10) 4
Actinobacteria BDP_2100 - Bifidobacteriaceae 2 (10) 4
Actinobacteria BDP_2111 - Bifidobacteriaceae 2 (10) 5
Actinobacteria BDP_2131 - Bifidobacteriaceae 2 (10) 8
Firmicutes BH1250 - Bacillales 4 (11) 9
Firmicutes BH1516 - Bacillales 2 (11) 6
Actinobacteria BIFBRE_03467 - Bifidobacteriaceae 1 (10) 1
Actinobacteria BIFBRE_03542 - Bifidobacteriaceae 1 (10) 2
Actinobacteria BL0176 - Bifidobacteriaceae 3 (10) 9
Actinobacteria BL0185 - Bifidobacteriaceae 4 (10) 28
Actinobacteria BL0610 - Bifidobacteriaceae 1 (10) 2
Actinobacteria BLA_0143 - Bifidobacteriaceae 4 (10) 11
Proteobacteria/beta BPSL1304 - Burkholderia 8 (8) 11
Proteobacteria/beta Bamb_2736 - Burkholderia 2 (8) 4
Proteobacteria/beta Bamb_4155 - Burkholderia 3 (8) 3
Actinobacteria BfrR - Bifidobacteriaceae 3 (10) 6
Chloroflexi BfrR - Chloroflexia 2 (5) 2
Firmicutes BfrR - Lactobacillaceae 1 (15) 1
Firmicutes BfrR - Streptococcaceae 4 (15) 7
Actinobacteria BgaR - Bifidobacteriaceae 6 (10) 22
Actinobacteria BgaR - Micrococcineae 2 (14) 6
Actinobacteria BgaR - Streptomycetaceae 3 (4) 8
Proteobacteria/Alpha BglR - Sphingomonadales 3 (7) 7
Actinobacteria BglR - Bifidobacteriaceae 4 (10) 10
Deinococcus-Thermus BglR - Deinococcus-Thermus 3 (5) 4
Firmicutes BglR - Enterococcaceae 1 (2) 2
Firmicutes BglR - Listeriaceae 4 (4) 8
Proteobacteria/beta BglR - Burkholderia 2 (8) 2
Proteobacteria/gamma BglR - Alteromonadales 6 (9) 35
Proteobacteria/gamma BglR - Enterobacteriales 1 (12) 2
Proteobacteria/gamma BglR - Shewanellaceae 6 (16) 24
Proteobacteria/gamma BglR - Vibrionales 3 (10) 7
Proteobacteria/Alpha BglR1 - Caulobacterales 2 (4) 2
Firmicutes BglR2 - Listeriaceae 4 (4) 16
Proteobacteria/Alpha BglR2 - Caulobacterales 3 (4) 10
Proteobacteria/Alpha BglR3 - Caulobacterales 4 (4) 8
Firmicutes BglZ - Bacillales 5 (11) 8
Actinobacteria Blon_0374 - Bifidobacteriaceae 1 (10) 3
Proteobacteria/beta Bphy_2245 - Burkholderia 2 (8) 2
Proteobacteria/beta Bphy_4590 - Burkholderia 5 (8) 10
Proteobacteria/beta Bphy_6994 - Burkholderia 2 (8) 2
Proteobacteria/beta Bpro_5109 - Comamonadaceae 2 (11) 3
Proteobacteria/Alpha CC1627 - Caulobacterales 4 (4) 14
Firmicutes CD0683 - Clostridia-2 1 (3) 2
Chloroflexi Caur_1157 - Chloroflexia 3 (5) 7
Chloroflexi Caur_3448 - Chloroflexia 5 (5) 9
Chloroflexi Caur_3866 - Chloroflexia 2 (5) 5
Proteobacteria/Alpha CceR (GapR) - Rhodobacterales 13 (15) 177
Firmicutes CcpA - Bacillales 11 (11) 559
Firmicutes CcpA - Clostridia-1 8 (8) 436
Firmicutes CcpA - Clostridia-2 3 (3) 113
Firmicutes CcpA - Lactobacillaceae 15 (15) 561
Firmicutes CcpA - Staphylococcaceae 7 (7) 391
Firmicutes CcpA - Streptococcaceae 15 (15) 968
Firmicutes CcpB - Lactobacillaceae 4 (15) 4
Firmicutes CcpB - Listeriaceae 4 (4) 4
Firmicutes CcpB - Streptococcaceae 5 (15) 5
Actinobacteria CelR - Micrococcineae 4 (14) 10
Actinobacteria CelR - Streptomycetaceae 4 (4) 49
Proteobacteria/gamma CelR - Vibrionales 5 (10) 10
Thermotogae CelR - Thermotogales 7 (11) 31
Proteobacteria/gamma CelR2 - Enterobacteriales 2 (12) 2
Proteobacteria/gamma CelR2 - Vibrionales 3 (10) 6
Proteobacteria/gamma CelR3 - Vibrionales 2 (10) 3
Actinobacteria Cg2314 - Corynebacteriaceae 1 (8) 2
Actinobacteria CldR - Bifidobacteriaceae 1 (10) 2
Proteobacteria/gamma Csal_3216 - Oceanospirillales/Alteromonadales 1 (12) 4
Actinobacteria CscR - Bifidobacteria 8 (10) 16
Proteobacteria/gamma CscR - Enterobacteriales 3 (12) 10
Deinococcus-Thermus DR2501 - Deinococcus-Thermus 3 (5) 8
Proteobacteria/gamma ECA4246 - Enterobacteriales 1 (12) 1
Firmicutes EF1410 - Enterococcaceae 1 (2) 2
Proteobacteria/gamma EbgR - Enterobacteriales 2 (12) 5
Proteobacteria/gamma EbgR - Psychromonadaceae/Aeromonadales 2 (6) 5
Proteobacteria/gamma EbgR - Vibrionales 7 (10) 30
Firmicutes ExuR - Bacillales 4 (11) 5
Firmicutes ExuR - Clostridia-1 3 (8) 20
Firmicutes ExuR - Lactobacillaceae 2 (15) 2
Actinobacteria FruR - Micrococcineae 2 (14) 9
Proteobacteria/Gamma FruR - Oceanospirillales/Alteromonadales 2 (12) 9
Proteobacteria/gamma FruR - Enterobacteriales 12 (12) 213
Proteobacteria/gamma FruR - Pasteurellales 3 (9) 3
Proteobacteria/gamma FruR - Pseudomonadaceae 8 (8) 16
Proteobacteria/gamma FruR - Psychromonadaceae/Aeromonadales 6 (6) 22
Proteobacteria/gamma FruR - Vibrionales 10 (10) 60
Proteobacteria/Alpha FruR2 - Rhodobacterales 1 (15) 3
Proteobacteria/Alpha FruR2 - Rhodospirillales 3 (9) 8
Proteobacteria/beta FruR2 - Comamonadaceae 2 (11) 8
Proteobacteria/beta FruR2 - Ralstonia 2 (6) 8
Proteobacteria/beta FruR2 - Various betaproteobacteria 1 (12) 4
Proteobacteria/gamma FruR2 - Xanthomonadales 3 (4) 11
Actinobacteria FucR - Bifidobacteriaceae 2 (10) 4
Firmicutes GalR - Lactobacillaceae 11 (15) 30
Firmicutes GalR - Streptococcaceae 9 (15) 20
Proteobacteria/delta GalR - Desulfovibrionales 2 (10) 5
Proteobacteria/gamma GalR - Alteromonadales 2 (9) 6
Proteobacteria/gamma GalR - Pasteurellales 5 (9) 16
Proteobacteria/gamma GalR - Shewanellaceae 1 (16) 2
Proteobacteria/gamma GalR - Vibrionales 8 (10) 30
Thermotogae GalR - Thermotogales 9 (11) 19
Proteobacteria/gamma GalR/GalS - Enterobacteriales 11 (12) 78
Actinobacteria GalR2 - Bifidobacteriaceae 1 (10) 5
Firmicutes GanR - Bacillales 5 (11) 8
Thermotogae GloR - Thermotogales 5 (11) 8
Proteobacteria/Alpha GluR - Caulobacterales 3 (4) 17
Actinobacteria GlxR - Bifidobacteriaceae 1 (10) 2
Actinobacteria GntR - Bifidobacteriaceae 1 (10) 2
Proteobacteria/alpha GntR - Rhizobiales 1 (15) 4
Proteobacteria/alpha GntR - Rhodospirillales 1 (9) 4
Proteobacteria/beta GntR - Burkholderia 1 (8) 4
Proteobacteria/beta GntR - Comamonadaceae 8 (11) 28
Proteobacteria/beta GntR - Various betaproteobacteria 1 (12) 1
Proteobacteria/gamma GntR - Alteromonadales 1 (9) 5
Proteobacteria/gamma GntR - Enterobacteriales   12 (12) 61
Proteobacteria/gamma GntR - Oceanospirillales/Alteromonadales 3 (12) 8
Proteobacteria/gamma GntR - Pasteurellales 7 (9) 28
Proteobacteria/gamma GntR - Pseudomonadaceae 8 (8) 32
Proteobacteria/gamma GntR - Psychromonadaceae/Aeromonadales 5 (6) 22
Proteobacteria/gamma GntR - Shewanellaceae 1 (16) 4
Proteobacteria/gamma GntR - Vibrionales 8 (10) 33
Firmicutes GntR2 - Bacillales 4 (11) 8
Firmicutes GntR2 - Lactobacillaceae 2 (15) 2
Actinobacteria GosR - Bifidobacteriaceae 6 (10) 17
Actinobacteria GosR2 - Bifidobacteriaceae 1 (10) 3
Proteobacteria/Beta GudR - Comamonadaceae 4 (11) 11
Proteobacteria/beta HpxR - Ralstonia 3 (6) 3
Actinobacteria HxlR - Bifidobacteriaceae 2 (10) 5
Firmicutes HxlR - Lactobacillaceae 2 (15) 4
Proteobacteria/Alpha IdnR - Rhizobiales 7 (15) 32
Proteobacteria/Gamma IdnR - Enterobacteriales 4 (12) 7
Actinobacteria IolR - Micrococcineae 2 (14) 6
Actinobacteria IolR - Streptomycetaceae 2 (4) 8
Firmicutes IolR - Thermoanaerobacterales 5 (7) 7
Proteobacteria/Alpha IolR - Rhizobiales 2 (15) 8
Proteobacteria/Alpha IolR - Rhodobacterales 3 (15) 13
Proteobacteria/gamma IolR - Oceanospirillales/Alteromonadales 1 (12) 1
Firmicutes IolR1 - Bacillales 5 (11) 13
Actinobacteria IolR2 - Corynebacteriaceae 1 (8) 2
Firmicutes IolR2 - Bacillales 2 (11) 4
Proteobacteria/Alpha Jann_1107 - Rhodobacterales 2 (15) 5
Proteobacteria/Alpha Jann_1459 - Rhodobacterales 4 (15) 10
Proteobacteria/Alpha Jann_3936 - Rhodobacterales 1 (15) 4
Bacteroidetes KdgR - Bacteroidaceae 10 (11) 62
Firmicutes KdgR - Bacillales 3 (11) 13
Proteobacteria/Alpha KglR - Rhizobiales 2 (15) 2
Proteobacteria/Alpha KglR - Rhodobacterales 1 (15) 1
Chloroflexi KojR - Chloroflexia 2 (5) 5
Firmicutes KojR - Bacillales 2 (11) 5
Firmicutes KojR - Thermoanaerobacterales 5 (7) 11
Firmicutes LACR_0766 - Streptococcaceae 2 (15) 3
Firmicutes LBA1472 - Lactobacillaceae 2 (15) 4
Firmicutes LJ1265 - Lactobacillaceae 2 (15) 4
Firmicutes LSEI_0368 - Lactobacillaceae 2 (15) 8
Proteobacteria/gamma LacI - Enterobacteriales 5 (12) 5
Actinobacteria LacR - Bifidobacteriaceae 8 (10) 27
Firmicutes LacR - Lactobacillaceae 7 (15) 11
Proteobacteria/Gamma LfaR - Enterobacteriales 6 (12) 23
Bacteroidetes LgoR - Bacteroidaceae 6 (11) 13
Firmicutes Lmo0031 - Listeriaceae 2 (4) 8
Firmicutes Lp_3221 - Lactobacillaceae 3 (15) 6
Proteobacteria/gamma MalI - Enterobacteriales 5 (12) 19
Proteobacteria/gamma MalI - Vibrionales 4 (10) 15
Bacteroidetes MalR - Bacteroidaceae 5 (11) 30
Firmicutes MalR - Lactobacillaceae 7 (15) 11
Firmicutes MalR - Staphylococcaceae 4 (7) 5
Firmicutes MalR - Streptococcaceae 15 (15) 80
Proteobacteria/Alpha MalR - Sphingomonadales 3 (7) 6
Proteobacteria/gamma MalR - Alteromonadales 7 (9) 44
Proteobacteria/gamma MalR - Shewanellaceae 11 (16) 67
Proteobacteria/gamma MalR - Xanthomonadales 3 (4) 14
Firmicutes MalR1 - Clostridia-1 4 (8) 4
Actinobacteria MalR1/MalR2/MalR3 - Bifidobacteriaceae 10 (10) 108
Firmicutes MalR2 - Bacillales 7 (11) 24
Firmicutes MalR2 - Clostridia-1 4 (8) 10
Firmicutes MalR2 - Streptococcaceae 4 (15) 4
Firmicutes MalR2 - Thermoanaerobacterales 5 (7) 17
Firmicutes MalR3 - Lactobacillaceae 6 (15) 17
Actinobacteria MalR4 - Bifidobacteriaceae 3 (10) 14
Actinobacteria MalR5 - Bifidobacteriaceae 3 (10) 12
Actinobacteria ManR - Streptomycetaceae 4 (4) 15
Proteobacteria/gamma ManR - Psychromonadaceae/Aeromonadales 1 (6) 5
Proteobacteria/gamma ManR - Xanthomonadales 3 (4) 13
Proteobacteria/gamma ManR1 - Alteromonadales 3 (9) 7
Proteobacteria/gamma ManR1 - Shewanellaceae 2 (16) 4
Proteobacteria/gamma ManR2 - Alteromonadales 1 (9) 5
Proteobacteria/gamma ManR2 - Shewanellaceae 1 (16) 5
Firmicutes MdxR - Bacillales 2 (11) 4
Firmicutes MdxR - Lactobacillaceae 6 (15) 11
Firmicutes MdxR - Listeriaceae 4 (4) 8
Firmicutes MdxR - Streptococcaceae 1 (15) 1
Proteobacteria/Alpha Mll1683 - Rhizobiales 6 (15) 16
Proteobacteria/Alpha MocR - Rhizobiales 5 (15) 12
Actinobacteria MsmR - Bifidobacteriaceae 4 (10) 15
Actinobacteria MsmR - Micrococcineae 3 (14) 8
Firmicutes MsmR - Bacillales 5 (11) 6
Actinobacteria MsmR1 - Bifidobacteriaceae 3 (10) 4
Proteobacteria/Alpha NGR_b22600 - Rhizobiales 1 (15) 4
Proteobacteria/gamma NagR - Alteromonadales 3 (9) 27
Proteobacteria/gamma NagR - Oceanospirillales/Alteromonadales 3 (12) 19
Proteobacteria/gamma NagR - Shewanellaceae 15 (16) 105
Proteobacteria/gamma NagR - Xanthomonadales 4 (4) 17
Firmicutes NigR - Lactobacillaceae 2 (15) 5
Firmicutes NigR - Streptococcaceae 1 (15) 2
Firmicutes NtdR - Bacillales 3 (11) 7
Proteobacteria/Alpha OB2597_06045 - Rhodobacterales 1 (15) 2
Proteobacteria/Alpha OG2516_10476 - Rhodobacterales 1 (15) 4
Firmicutes OglR2 - Lactobacillaceae 1 (15) 1
Proteobacteria/gamma PFL_0254 - Pseudomonadaceae 3 (8) 4
Proteobacteria/gamma PMI2934 - Enterobacteriales 1 (12) 1
Proteobacteria/gamma PSPTO0485 - Pseudomonadaceae 1 (8) 1
Proteobacteria/gamma Patl_0292 - Alteromonadales 1 (9) 2
Proteobacteria/Alpha PckR - Rhizobiales 10 (15) 99
Proteobacteria/Alpha PsiR - Rhizobiales 4 (15) 16
Actinobacteria PtsR - Bifidobacteriaceae 7 (10) 13
Proteobacteria/gamma PtsR - Enterobacteriales 1 (12) 2
Proteobacteria/beta PtxS - Burkholderia 8 (8) 11
Proteobacteria/beta PtxS - Ralstonia 2 (6) 3
Proteobacteria/gamma PtxS - Enterobacteriales 5 (12) 5
Proteobacteria/gamma PtxS - Pseudomonadaceae 4 (8) 10
Proteobacteria/gamma PurR - Enterobacteriales 12 (12) 313
Proteobacteria/gamma PurR - Pasteurellales 9 (9) 77
Proteobacteria/gamma PurR - Vibrionales 10 (10) 149
Proteobacteria/Alpha RL3595 - Rhizobiales 4 (15) 8
Proteobacteria/Alpha RL4253 - Rhizobiales 3 (15) 11
Proteobacteria/beta RSc1790 - Ralstonia 5 (6) 5
Proteobacteria/gamma RafR - Enterobacteriales 4 (12) 8
Actinobacteria RbsR - Corynebacteriaceae 3 (8) 6
Actinobacteria RbsR - Streptomycetaceae 3 (4) 3
Firmicutes RbsR - Bacillales 11 (11) 11
Firmicutes RbsR - Clostridia-1 4 (8) 5
Firmicutes RbsR - Lactobacillaceae 10 (15) 18
Firmicutes RbsR - Staphylococcaceae 2 (7) 2
Firmicutes RbsR - Thermoanaerobacterales 2 (7) 4
Proteobacteria/beta RbsR - Burkholderia 7 (8) 7
Proteobacteria/beta RbsR - Comamonadaceae 2 (11) 2
Proteobacteria/beta RbsR - Ralstonia 2 (6) 2
Proteobacteria/delta RbsR - Desulfovibrionales 1 (10) 1
Proteobacteria/gamma RbsR - Enterobacteriales 11 (12) 17
Proteobacteria/gamma RbsR - Pasteurellales 6 (9) 6
Proteobacteria/gamma RbsR - Pseudomonadaceae 5 (8) 5
Proteobacteria/gamma RbsR - Psychromonadaceae/Aeromonadales 6 (6) 8
Proteobacteria/gamma RbsR - Shewanellaceae 2 (16) 4
Proteobacteria/gamma RbsR - Vibrionales 10 (10) 15
Thermotogae RbsR - Thermotogales 8 (11) 15
Actinobacteria RbsR1 - Bifidobacteriaceae 2 (10) 5
Actinobacteria RbsR2 - Bifidobacteriaceae 3 (10) 6
Firmicutes RbsR2 - Staphylococcaceae 6 (7) 7
Firmicutes RbsR2 - Streptococcaceae 7 (15) 9
Proteobacteria/Alpha RbsR2 - Rhizobiales 2 (15) 4
Proteobacteria/Alpha RbsR2 - Rhodobacterales 1 (15) 3
Actinobacteria RbsR3 - Bifidobacteriaceae 5 (10) 11
Proteobacteria/Alpha RbtR - Rhodobacterales 1 (15) 4
Firmicutes RegR - Streptococcaceae 6 (15) 27
Proteobacteria/beta Reut_C5892 - Ralstonia 1 (6) 1
Actinobacteria RhaR - Frankineae/Propionibacterineae/Pseudonocardiaceae 2 (9) 10
Actinobacteria RhaR - Micrococcineae 5 (14) 29
Actinobacteria RhaR - Mycobacteriaceae 2 (9) 2
Actinobacteria RhaR - Nocardiaceae 2 (4) 5
Actinobacteria RhaR - Streptomycetaceae 3 (4) 14
Proteobacteria/Alpha RhiR - Rhizobiales 4 (15) 16
Proteobacteria/gamma RhiR - Enterobacteriales 1 (12) 2
Chloroflexi RhmR - Chloroflexia 1 (5) 1
Proteobacteria/beta Rmet_4647 - Ralstonia 2 (6) 4
Firmicutes SAG1808 - Streptococcaceae 2 (15) 3
Actinobacteria SAV1329 - Streptomycetaceae 2 (4) 4
Actinobacteria SCO1956 - Streptomycetaceae 2 (4) 2
Actinobacteria SCO2753 - Streptomycetaceae 4 (4) 10
Actinobacteria SCO4158 - Streptomycetaceae 4 (4) 12
Actinobacteria SCO5692 - Streptomycetaceae 3 (4) 13
Proteobacteria/Alpha SMb20014 - Rhizobiales 4 (15) 5
Proteobacteria/Alpha SMb20537 - Rhizobiales 5 (15) 10
Proteobacteria/Alpha SMb20667 - Rhizobiales 6 (15) 29
Proteobacteria/Alpha SMb20717 - Rhizobiales 4 (15) 16
Proteobacteria/Alpha SMb21598 - Rhizobiales 6 (15) 13
Proteobacteria/Alpha SMb21706 - Rhizobiales 6 (15) 15
Proteobacteria/Alpha SMc04260 - Rhizobiales 6 (15) 15
Proteobacteria/Alpha SPO0590 - Rhodobacterales 5 (15) 21
Proteobacteria/Alpha SPOA0336 - Rhodobacterales 2 (15) 6
Proteobacteria/gamma STM1555 - Enterobacteriales 3 (12) 4
Actinobacteria ScrR - Bifidobacteriaceae 7 (10) 23
Firmicutes ScrR - Bacillales 4 (11) 7
Firmicutes ScrR - Clostridia-1 2 (8) 3
Firmicutes ScrR - Lactobacillaceae 7 (15) 24
Firmicutes ScrR - Staphylococcaceae 6 (7) 16
Firmicutes ScrR - Streptococcaceae 13 (15) 27
Proteobacteria/Gamma ScrR - Psychromonadaceae/Aeromonadales 3 (6) 8
Proteobacteria/alpha ScrR - Sphingomonadales 2 (7) 9
Proteobacteria/beta ScrR - Burkholderia 5 (8) 20
Proteobacteria/beta ScrR - Ralstonia 1 (6) 2
Proteobacteria/gamma ScrR - Alteromonadales 5 (9) 21
Proteobacteria/gamma ScrR - Enterobacteriales 6 (12) 16
Proteobacteria/gamma ScrR - Oceanospirillales/Alteromonadales 1 (12) 4
Proteobacteria/gamma ScrR - Pseudomonadaceae 3 (8) 6
Proteobacteria/gamma ScrR - Shewanellaceae 5 (16) 16
Proteobacteria/gamma ScrR - Vibrionales 1 (10) 4
Firmicutes ScrR2 - Bacillales 3 (11) 5
Firmicutes ScrR2 - Lactobacillaceae 1 (15) 2
Proteobacteria/gamma Sde_0506 - Alteromonadales 2 (9) 6
Proteobacteria/gamma SgaR - Enterobacteriales 9 (12) 34
Proteobacteria/gamma SgaR - Pasteurellales 1 (9) 4
Proteobacteria/gamma SgaR - Psychromonadaceae/Aeromonadales 3 (6) 12
Proteobacteria/gamma SgaR - Vibrionales 2 (10) 12
Actinobacteria SgaR2 - Bifidobacteriaceae 2 (10) 4
Proteobacteria/Alpha SmoR - Rhizobiales 4 (15) 8
Proteobacteria/Alpha SmoR - Rhodobacterales 7 (15) 15
Proteobacteria/Alpha SocR - Rhizobiales 3 (15) 12
Proteobacteria/Alpha SocR - Rhodobacterales 1 (15) 1
Proteobacteria/gamma SuxR - Xanthomonadales 2 (4) 4
Proteobacteria/Beta TalR - Comamonadaceae 2 (11) 7
Proteobacteria/Beta TalR - Ralstonia 1 (6) 4
Proteobacteria/Gamma TalR - Enterobacteriales 2 (12) 7
Proteobacteria/Alpha ThuR - Rhizobiales 5 (15) 18
Firmicutes TreR - Thermoanaerobacterales 3 (7) 6
Proteobacteria/gamma TreR - Alteromonadales 3 (9) 16
Proteobacteria/gamma TreR - Enterobacteriales 8 (12) 8
Proteobacteria/gamma TreR - Psychromonadaceae/Aeromonadales 4 (6) 7
Proteobacteria/gamma TreR - Shewanellaceae 2 (16) 11
Proteobacteria/gamma TreR - Vibrionales 8 (10) 13
Proteobacteria/Beta UdhR - Burkholderia 4 (8) 13
Thermotogae UgpR - Thermotogales 7 (11) 9
Actinobacteria UriR - Corynebacteriaceae 2 (8) 3
Firmicutes UriR - Enterococcaceae 2 (2) 3
Firmicutes UriR - Listeriaceae 4 (4) 4
Bacteroidetes UxaR - Bacteroidaceae 6 (11) 12
Bacteroidetes UxuR - Bacteroidaceae 3 (11) 3
Firmicutes UxuR - Bacillales 3 (11) 12
Firmicutes UxuR - Clostridia-3 8 (14) 40
Proteobacteria/Gamma VCA0673 - Vibrionales 4 (10) 9
Proteobacteria/gamma VF_1255 - Vibrionales 5 (10) 5
Proteobacteria/gamma VP2396 - Vibrionales 2 (10) 14
Proteobacteria/gamma VVA0138 - Vibrionales 1 (10) 6
Proteobacteria/gamma XCC2209 - Xanthomonadales 3 (4) 22
Proteobacteria/gamma XCC4129 - Xanthomonadales 2 (4) 2
Proteobacteria/gamma XltR - Enterobacteriales 1 (12) 1
Proteobacteria/gamma XltR - Oceanospirillales/Alteromonadales 2 (12) 11
Proteobacteria/gamma XltR - Shewanellaceae 2 (16) 8
Actinobacteria XosR - Bifidobacteriaceae 4 (10) 19
Proteobacteria/Alpha XylR - Rhizobiales 8 (15) 17
Firmicutes YcjW - Listeriaceae 3 (4) 9
Proteobacteria/gamma YcjW - Enterobacteriales 2 (12) 4
Proteobacteria/Alpha blr3394 - Rhizobiales 2 (15) 2
Proteobacteria/Alpha pRL90265 - Rhizobiales 3 (15) 8
Proteobacteria/gamma y3436 - Enterobacteriales 1 (12) 2