Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for IclR transcription factor family

General statistics
TF regulogs 20
TF regulons 108
TF binding sites 476

IclR family of transcription factors includes diverse regulators that are involved the control of primary and secondary metabolism, virulence, multidrug resistance, degradation of aromatics, quorum sensing, and sporulation [22382436]. The IclR family comprises regulators acting as repressors, activators and proteins with a dual role [16472303]. IclR-family regulators collectively respond to wide variety of environmental signals, including glyoxylate, pyruvate, 4-nitrotoluene, benzonitrile, glycerol, glucose, 1-hexanol, succinic semialdehyde, allantoin, and many others. IclR-family regulators consist of two characteristic domains, an N-terminal HTH DNA binding domain (PF09339) and a C-terminal effector binding domain (PF01614). more

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Proteobacteria/gamma AllR - Enterobacteriales 2 (12) 6
Actinobacteria Cg0646 - Corynebacteriaceae 2 (8) 2
Actinobacteria GenR - Corynebacteriaceae 2 (8) 6
Proteobacteria/Gamma HmgR - Pseudomonadaceae 5 (8) 12
Proteobacteria/gamma IclR - Enterobacteriales 10 (12) 10
Proteobacteria/gamma KdgR - Enterobacteriales 9 (12) 159
Proteobacteria/gamma KdgR - Pasteurellales 2 (9) 17
Proteobacteria/gamma KdgR - Vibrionales 4 (10) 40
Thermotogae KdgR - Thermotogales 5 (11) 26
Firmicutes KipR - Bacillales 7 (11) 9
Actinobacteria LtbR - Nocardiaceae 4 (4) 8
Actinobacteria LtbR - Bifidobacteriaceae 9 (10) 19
Actinobacteria LtbR - Corynebacteriaceae 8 (8) 52
Actinobacteria LtbR - Frankineae/Propionibacterineae/Pseudonocardiaceae 8 (9) 24
Actinobacteria LtbR - Micrococcineae 9 (14) 26
Actinobacteria LtbR - Mycobacteriaceae 8 (9) 30
Actinobacteria LtbR - Streptomycetaceae 4 (4) 8
Chloroflexi MhpR - Chloroflexia 4 (5) 6
Actinobacteria PcaR - Corynebacteriaceae 2 (8) 8
Proteobacteria/gamma YiaJ - Enterobacteriales 4 (12) 8