Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for RutR transcription factor

General statistics
Genomes 118
TF regulogs 17
TF regulons 81
TF binding sites 273

Transcription factors RutR belong to the TetR protein family and control the pyrimidine degradation pathways and nucleotide metabolism in Proteobacteria. The RutR regulon and its DNA-binding motif were discovered by application of the comparative genomic approach to the pyrimidine degradation operons in the Enterobacteria lineage. The content of the reconstructed RutR regulons in various taxonomic groups of Proteobacteria is significantly diverse.

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Proteobacteria/alpha RutR - Caulobacterales 2 (4) 4
Proteobacteria/alpha RutR - Rhizobiales 9 (15) 44
Proteobacteria/alpha RutR - Rhodobacterales 13 (15) 62
Proteobacteria/alpha RutR - Rhodospirillales 1 (9) 2
Proteobacteria/beta RutR - Burkholderia 7 (8) 12
Proteobacteria/beta RutR - Ralstonia 4 (6) 4
Proteobacteria/gamma RutR - Alteromonadales 4 (9) 19
Proteobacteria/gamma RutR2 - Alteromonadales 1 (9) 2
Proteobacteria/gamma RutR - Enterobacteriales 7 (12) 13
Proteobacteria/gamma RutR - Moraxellaceae 2 (4) 8
Proteobacteria/gamma RutR - Oceanospirillales/Alteromonadales 8 (12) 32
Proteobacteria/gamma RutR - Pseudomonadaceae 7 (8) 29
Proteobacteria/gamma RutR2 - Pseudomonadaceae 4 (8) 7
Proteobacteria/gamma RutR3 - Pseudomonadaceae 7 (8) 23
Proteobacteria/gamma RutR4 - Pseudomonadaceae 2 (9) 4
Proteobacteria/gamma RutR - Psychromonadaceae/Aeromonadales 1 (6) 4
Proteobacteria/gamma RutR - Vibrionales 2 (10) 4