Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for PhnF transcription factor

General statistics
Genomes 115
TF regulogs 11
TF regulons 47
TF binding sites 95

Transcription factor PhnF from the GntR protein family regulates the phosphonate utilization genes in Proteobacteria. In E.coli, phnF was identified as a part of the phn gene locus, however it was uncharacterized. The PhnF regulon and its DNA-binding motif were discovered by application of the comparative genomic approach.

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Proteobacteria PhnF - Burkholderia 4 (8) 15
Proteobacteria PhnF - Comamonadaceae 1 (11) 2
Proteobacteria PhnF - Oceanospirillales/Alteromonadales 1 (12) 4
Proteobacteria PhnF - Pseudomonadaceae 3 (8) 3
Proteobacteria PhnF - Psychromonadaceae/Aeromonadales 1 (6) 1
Proteobacteria PhnF - Rhizobiales 12 (15) 24
Proteobacteria PhnF - Rhodobacterales 11 (15) 23
Proteobacteria PhnF - Various betaproteobacteria 2 (12) 4
Proteobacteria/beta PhnF - Ralstonia 4 (6) 8
Proteobacteria/delta PhnF - Desulfovibrionales 2 (10) 5
Proteobacteria/gamma PhnF - Enterobacteriales 6 (12) 6