Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for NagR transcription factor

General statistics
Genomes 75
TF regulogs 7
TF regulons 51
TF binding sites 254

Transcription factor NagR from the LacI protein family regulates the chitin and N-acetylglucosamine utilization genes in various Gammaproteobacteria. The NagR regulons and its DNA-binding motif was discovered by application of the comparative genomic approach [16857666], and was then experimentally validated in Shewanella oneidensis and [21810205] Xanthomonas campestris [20081036]. NagR is a non-orthologous replacement for other regulators of chitin utilization, NagC (ROK family) and NagQ (GntR family), that control the chitin utilization genes in other taxonomic groups of Proteobacteria [16857666].

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Actinobacteria GenR - Corynebacteriaceae 2 (8) 6
Firmicutes NagR - Bacillales 9 (11) 14
Firmicutes NagR - Streptococcaceae 15 (15) 66
Proteobacteria/gamma NagR - Alteromonadales 3 (9) 27
Proteobacteria/gamma NagR - Oceanospirillales/Alteromonadales 3 (12) 19
Proteobacteria/gamma NagR - Shewanellaceae 15 (16) 105
Proteobacteria/gamma NagR - Xanthomonadales 4 (4) 17