Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for GntR transcription factor

General statistics
Genomes 137
TF regulogs 13
TF regulons 57
TF binding sites 234

GntR is a repressor belonging to the LacI family. The GntR function was experimentally analyzed in Escherichia coli, where it control genes involved in gluconate and idonate utilization and the Entner-Doudoroff pathway genes [9537375]. GntR protein dimer binds to its palindromic operator in the absence of inducer, gluconate. In the precence of gluconate GntR protein dissociates form DNA. We used a comparative genomics approach to reconstruct transcriptional regulons controlled by GntR orthologs in Proteobacteria [24966856].

Phylum Regulog TF regulons (studied genomes) TFBSs Logo
Proteobacteria/alpha GntR - Rhizobiales 1 (15) 4
Proteobacteria/alpha GntR - Rhodospirillales 1 (9) 4
Proteobacteria/beta GntR - Burkholderia 1 (8) 4
Proteobacteria/beta GntR - Comamonadaceae 8 (11) 28
Proteobacteria/beta GntR - Various betaproteobacteria 1 (12) 1
Proteobacteria/gamma GntR - Alteromonadales 1 (9) 5
Proteobacteria/gamma GntR - Enterobacteriales   12 (12) 61
Proteobacteria/gamma GntR - Oceanospirillales/Alteromonadales 3 (12) 8
Proteobacteria/gamma GntR - Pasteurellales 7 (9) 28
Proteobacteria/gamma GntR - Pseudomonadaceae 8 (8) 32
Proteobacteria/gamma GntR - Psychromonadaceae/Aeromonadales 5 (6) 22
Proteobacteria/gamma GntR - Shewanellaceae 1 (16) 4
Proteobacteria/gamma GntR - Vibrionales 8 (10) 33