Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs for Glycine (RF00504) RNA regulatory element

The Glycine riboswitch, is a highly conserved RNA structure that was originally identified upstream of the glycine cleavage system genes gcvT-gcvPA-gcvPB in numerous bacterial species [15096624]. The Bacillus subtilis gcvT motif was then demonstrated to serve as a glycine-dependent riboswitch that activate gene expression upon binding of glycine [15472076]. Glycine riboswitch is a genetic ?on? switch that functions as an antiterminator. Glycine riboswitches usually consist of two binding domains with similar structures in tandem. The tandem riboswitch structure promotes a positive cooperative response to increasing concentrations of glycine [18042658]. more

Phylum Regulog RNA regulons (studied genomes) RNA sites
Actinobacteria Glycine - Corynebacteriaceae 2 (8) 4
Actinobacteria Glycine - Mycobacteriaceae 8 (9) 19
Chloroflexi Glycine - Chloroflexia 3 (5) 6
Firmicutes Glycine - Bacillales 10 (11) 22
Firmicutes Glycine - Clostridiaceae 18 (20) 52
Firmicutes Glycine - Staphylococcaceae 7 (7) 8
Firmicutes Glycine - Streptococcaceae 12 (15) 18
Proteobacteria Glycine - Burkholderia 8 (8) 20
Proteobacteria Glycine - Caulobacterales 4 (4) 11
Proteobacteria Glycine - Enterobacteriales 1 (12) 2
Proteobacteria Glycine - Pasteurellales 9 (9) 18
Proteobacteria Glycine - Pseudomonadaceae 1 (8) 2
Proteobacteria Glycine - Ralstonia 6 (6) 22
Proteobacteria Glycine - Rhizobiales 15 (15) 36
Proteobacteria Glycine - Rhodobacterales 14 (15) 31
Proteobacteria Glycine - Shewanellaceae 14 (16) 27
Proteobacteria Glycine - Vibrionales 10 (10) 20
Proteobacteria/delta Glycine - Desulfovibrionales 3 (10) 6