Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Collection of regulogs involved in Branched-chain amino acid degradation

Type Phylum Regulog Regulons (studied genomes) Regulatory sites
TF Firmicutes BkdR - Bacillales 10 (11) 26
TF Proteobacteria/alpha LiuR - Caulobacterales 4 (4) 14
TF Proteobacteria/alpha LiuR - Rhizobiales 9 (15) 84
TF Proteobacteria/alpha LiuR - Rhodobacterales 13 (15) 19
TF Proteobacteria/alpha LiuR - Rhodospirillales 3 (9) 17
TF Proteobacteria/alpha LiuR - Sphingomonadales 6 (7) 65
TF Proteobacteria/beta LiuQ - Burkholderia 8 (8) 32
TF Proteobacteria/beta LiuQ - Comamonadaceae 2 (11) 8
TF Proteobacteria/beta LiuQ - Ralstonia 4 (6) 14
TF Proteobacteria/beta LiuR - Burkholderia 2 (8) 6
TF Proteobacteria/beta LiuR - Comamonadaceae 9 (11) 59
TF Proteobacteria/beta LiuR - Ralstonia 6 (6) 57
TF Proteobacteria/beta LiuR - Various betaproteobacteria 5 (12) 31
TF Proteobacteria/gamma LiuR - Alteromonadales 8 (9) 65
TF Proteobacteria/gamma LiuR - Oceanospirillales/Alteromonadales 6 (12) 28
TF Proteobacteria/gamma LiuR - Pseudomonadaceae 8 (8) 32
TF Proteobacteria/gamma LiuR - Psychromonadaceae/Aeromonadales 2 (6) 20
TF Proteobacteria/gamma LiuR - Shewanellaceae 16 (16) 134
TF Proteobacteria/gamma LiuR - Vibrionales 6 (10) 38